Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral5286g00025 ATGCTTCTGCAAAACTTCCCTTTGTTTCCTGAGACGCACAAGGATATTGCTGTGATCATGGAAATCAAAGGGATGTTAGAGTGGGATTGGTCAGTGGATATGCAGGTCTTTCACAGAGACGGCAATGGCATTGCTGATTTACTAGCCAAAAGAGCACTTAATGGAGCAATGGGTCTGGAAATACTGGGCCCTGAGACAATGATGGAAATATTGCAGGCCACTGATGTTATACTCACTGAAGATAGGAAAGATGGAGGTTATATTCAATGCTCGAGATCTCATGACCAGTTCGTTGCTGAAGAAGATGAGTCTATACTTCCAAGATTCCAAATCCTTGCGATGGTGCGTCATGCTGATGGAGTTGGGGGTTCTTCAAGTTCTTCCGCTTCAACTAAGAGAAGGAAGTATGATGTGTTTTTGAGCTTTAGAGGGGAAGATACTCGGAAAAATTTTACTGATCATTTGTATGCTGCTTTAAAACGCAAAGGATTGAGAACTTTCCGAGATGACGAAGAACTTGAAAGGGGAGAATCTATTAATCAGATAAAGGAAGAGACAAGTCTTCAAGTATTTCCGATATTTCACGGTGTAGATCCTTCTAATGTTAGGAAACAAAAAGGAAGTTTTGCAGAAGCATTCACAAAGCATGAAGAAAGATTTGCTGAAGACAAAATAAAAGTGCAAAAGTGGAGAGATGCTTTAAAAAAAGTTGCTGCTTTATCTGGCTGGGACTCAAAAAATCGGTATGAAACAGAATTCATTGAAAGCATTGCTGATGAAATCGGGTCAAAGTTACTTGATAAATCAGCATCTGATCTTGGCAAGTTAATTGGAATTGAACCAAAATTAGATGAATTGAATTCAATCATAGCAAGGGAATCAGAAGAAGTTGGGTTTATAGGAATATGGGGTGCAGGAGGCGTAGGCAAAACAACTCTTGCTAGAGCCTTTTATGAGCGAGAACGAAAGCGAAAGAGCAAAAACTTTGAGATTCACTGCTTCCTTGATAATATTAGAGAGGTATGTGAAAAAGATGGTTTGATTTCGTTGCAAAGAAAACTTCTTTTATCTTTGTACAAAAGGAGTATAGAAGTGGCTGATTTTTATGAAGCAATGGAGTTAATAAAAAGGAAGTTAACCGACAGAGAAATTCTACTTGTCCTTGATGATGTGAGTCATGTTAGCCAACTTGAGAAGTTGGCTCCAAGGCAAGGATGGTTCAGCAAAGGGAGCATAATAGTGATAACAACAAGGGATAAGCATTTGCTATCATCATATGGTGTATCTGATAGTGCTATATATCACATTGAATTCTTGAGTGATAGCGAGTCCCTTGAACTTCTCATTCAAAATGCCTTTAAAGAAGGGCAACCTAATGAAGATTATTTGAACCTTGCTAGAACCGTCATTGAATATGCTGGAGGCCTTCCTTTAGCACTCGAAGTGTTAGGTTCATTTCTTTGCAAAAGAACGATAGAGGAATGGGAAGATGCACTAGCTAAGTTCGAGAAATGTCTTCCAGAGGACATTTCCAAGATACTTGAAGTGAGTCTTCACGGATTAGAGCTTAATGAGAAGACTATATTCTTGGATATTGCTTGCTTTTTCAATGGGATGGACGAAGATCATATCATACAAATTTTAGAAACATTGGATAAGGATCTTCACCCAAAAATTGGAATAAGGGTTCTTATTGACAAATCACTAGTAATTAATTATGAAGGGCATTTGCGGGTGCATGAAATTCTGCAAAATATGGCTAAACATGTTGTCTATCAAGAATCATCTGGTGATGCCAGCAAGCTTTCTAGGATATTGTCCTTGGATGATGCCAATCATGTATTAGGAGGAAATAAGGTGACGGAAGAAGCAACCCGGGGAATAATGCTAACATTAGAAAAGTCATGTGATGCATTTTGGGATCCTGAAGCCTTCTCAAAACTGAGTAATCTCAAGTTACTTATCATTTCAAGTCACTCATATGTTTCACATTGCCAACTGAATCTTCCGCTTGGACTCAAGTCTCTTTCCAAAGAGTTGAAAATCATAGAATGGGAGGGGTATCCATTATTTTATTTGCCAAGTCAACCTCAACTCAATCAACTTGTTGTGCTAAAAATGCGACATAGCAAGTTAAAAGAACTATGGAGAGGAAAACAGTCTCTTCGAAGCTTGAAGTCCATTGATCTATCTCATTCAGAATACCTCATCAAAACCCCGAATTTTGATGGAATTCCTCATCTTGAAAAGTTGATTCTTCAAGGGTGTTCTAACTTGGTTAAAATTCACCAGTCTCTTGGGCAACACAAGAAACTTGTCACTGTTGACTTGAAAGATTGCAAAGAAGTTAAAACGCTTCCAGAAAAATTTGAGATGAATAGCTTGGAGACTTTTATTCTATCAGGTTGTTCAAAAGTTAGAAAACTTCCTGAGTTTGGAAAAGATATGACATGTCTATCGAAGCTTGATTTAGAGAAGACTGCTCTAGCCAAACTACCTCAATCGTTGGGTAATTTGATTGGTCTCGTTGAATTAAATTTGACAAACTGCAAAAAGCTGGTCTGTCTTCCATGTAGTGTTAGTAAGTTGAAAGCTCTGAAAGTTATCAAATTGTCTCAATGCTCGAAGTTTTCAAGGCTGCCAGAGAATTTGAATGAAAATGAAGCTTTGGAAGAGCTGGATTTGAGTGGGATTGCTATACAGGGTTATCATTTAGTGACTACAATAGCGAAACACAATCTTCATCATCATGGAGTTGCTTATCCCTTCTTCAAAGGCCTTCAAGCTCCAAAAAGTTTTTGTTGCCGCCGTCTTTGTCGTTCTTGA 2826 0.3829 MLLQNFPLFPETHKDIAVIMEIKGMLEWDWSVDMQVFHRDGNGIADLLAKRALNGAMGLEILGPETMMEILQATDVILTEDRKDGGYIQCSRSHDQFVAEEDESILPRFQILAMVRHADGVGGSSSSSASTKRRKYDVFLSFRGEDTRKNFTDHLYAALKRKGLRTFRDDEELERGESINQIKEETSLQVFPIFHGVDPSNVRKQKGSFAEAFTKHEERFAEDKIKVQKWRDALKKVAALSGWDSKNRYETEFIESIADEIGSKLLDKSASDLGKLIGIEPKLDELNSIIARESEEVGFIGIWGAGGVGKTTLARAFYERERKRKSKNFEIHCFLDNIREVCEKDGLISLQRKLLLSLYKRSIEVADFYEAMELIKRKLTDREILLVLDDVSHVSQLEKLAPRQGWFSKGSIIVITTRDKHLLSSYGVSDSAIYHIEFLSDSESLELLIQNAFKEGQPNEDYLNLARTVIEYAGGLPLALEVLGSFLCKRTIEEWEDALAKFEKCLPEDISKILEVSLHGLELNEKTIFLDIACFFNGMDEDHIIQILETLDKDLHPKIGIRVLIDKSLVINYEGHLRVHEILQNMAKHVVYQESSGDASKLSRILSLDDANHVLGGNKVTEEATRGIMLTLEKSCDAFWDPEAFSKLSNLKLLIISSHSYVSHCQLNLPLGLKSLSKELKIIEWEGYPLFYLPSQPQLNQLVVLKMRHSKLKELWRGKQSLRSLKSIDLSHSEYLIKTPNFDGIPHLEKLILQGCSNLVKIHQSLGQHKKLVTVDLKDCKEVKTLPEKFEMNSLETFILSGCSKVRKLPEFGKDMTCLSKLDLEKTALAKLPQSLGNLIGLVELNLTNCKKLVCLPCSVSKLKALKVIKLSQCSKFSRLPENLNENEALEELDLSGIAIQGYHLVTTIAKHNLHHHGVAYPFFKGLQAPKSFCCRRLCRS 941
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral5286g00025 941 Pfam Leucine Rich Repeat 702 720 IPR011713 -
Pral5286g00025 941 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 272 532 IPR027417 -
Pral5286g00025 941 ProSiteProfiles TIR domain profile. 134 265 IPR000157 GO:0007165
Pral5286g00025 941 Gene3D - 265 430 IPR027417 -
Pral5286g00025 941 Gene3D Ribonuclease Inhibitor 792 911 IPR032675 -
Pral5286g00025 941 Gene3D Ribonuclease Inhibitor 635 791 IPR032675 -
Pral5286g00025 941 Pfam NB-ARC domain 293 512 IPR002182 GO:0043531
Pral5286g00025 941 SMART till_3 135 240 IPR000157 GO:0007165
Pral5286g00025 941 Pfam TIR domain 179 269 IPR000157 GO:0007165
Pral5286g00025 941 Gene3D - 438 522 IPR042197 -
Pral5286g00025 941 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 136 811 IPR044974 GO:0006952
Pral5286g00025 941 SUPERFAMILY L domain-like 626 906 - -
Pral5286g00025 941 SUPERFAMILY Toll/Interleukin receptor TIR domain 125 243 IPR035897 -
Pral5286g00025 941 Gene3D - 128 182 IPR035897 -
Pral5286g00025 941 Gene3D - 183 264 IPR035897 -
Pral5286g00025 941 PRINTS Disease resistance protein signature 378 392 - -
Pral5286g00025 941 PRINTS Disease resistance protein signature 473 487 - -
Pral5286g00025 941 PRINTS Disease resistance protein signature 720 736 - -
Pral5286g00025 941 PRINTS Disease resistance protein signature 299 314 - -
Pral5286g00025 941 SUPERFAMILY "Winged helix" DNA-binding domain 509 613 IPR036390 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral5286g00025 Pral-Chr5286 298712 320750 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral5286g00025 134 901 WRKY Transcription Factor Family AT4G12020 29.213 4.13e-85 298
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral5286g00025 - - pcin:129318967 927.932