Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral5286g00024 ATGGGACTAAAGCCACTTGAAGTTGACAGCGATGGCAACCCAACCTTTGTGATTGGTGATCCCATGAAGAAGGTTCAATGGGTAAAAACAAGTCGAAGAATCCGTTTAATCCTGGGGAGTGCCGCTTCTTGCTTTGCCGGTAGTTGCAGAATAGCTCTTAAGGACAGTGTCTGTAAGACACGACTCGAATTTACCGTTCTCTACAGGTGTTACTGTCAACAGGGTTTGCCTAGCATTATAGAGGAGGTGGAAGATCTGCTAGATCTTGGAGAATTTTGGTGCTGCCGCCAACAATTCTGGGTTGAGGGAACCATGAAGAAAAAAGGAAAGAAAATAGAATTGAGGCTGAGATTCCAGATCCTTGCGATGGCGTGTGATGTCGATGGAGTTGGGTGTTCTTCAAGTTCTTCTGCCTCAACTAAGAGATGGAAGTATGATGTGTTTTTGAGCTTTCGAGGGGAAGATAGTCGGAAAAATTTTACTGATCATTTGTATGTTGCTTTAAAACGCAAAGGATTGAGAACTTTTCGGGATGAGGAAGAACTTGAAAGGGGAGAATATATTAATCCAGGTTTAGTACAAGCAATTGATGAATCTCGTTCTGCAATTGTGGTGCTCTCCCCAAATTATGCTTCTTCAACTTGGTGTTTGGATGAGCTTCAAAAGATCCTGCAGTTAAAGGAAGAGTTGAGTCTTCAAGTATTTCCAATATTTTACCGTGTAGATCCCTCCGATGTTAGGAAACAAAAGGGATGTTTTGCAGAGGCATTCATAAAGTATGAAGAAAGATTTGTACAAGACAAAATGAAAGTGCGAAAATGGAGGGATGCTTTAGAAAAAGTTGCTACTATATCTGGTTGGGACTCACAAAATTGGCATGAAACGGAATTCATTGAAAGCATTGCTGAAGAAATCATGTCAAAGTTACGTGATGATGAATTGCCATCTGACCTTGGTATGTTAATTGGAATTCAACCAAAATTAGATGAATTAGAGTCAATCGTCGCAAGGGAATTGGGAGGAGTTGGGTTTATAGGAATATGGGGTACAGGAGGCATAGGCAAAACAACTCTTGCTAGAGCTTTTTATGAGCGAAAGCTCAAAAACTTTGAGATTCACTGCTTTCTTCATAATATTAGAGAGGCATATGAAAAAGAAGGTTTGATTTCATTGCAAAAAAGACTTCTTTTTTCTTTAGAGAAAAGAAGTATGGAAGTGTGTGATTGTTATGAAGGAATGAAGTTGATAAAAAACATGTTGCGCAATAGAAAAGTTCTACTTGTCCTTGATGATGTGAGTGACATTAGCCAACTTGAAAATTTGGCTCCAAAGCAAGGATGGTTCAGCAAAGGGAGTATAATAATAATAACAACCAGGGACAAGCATTTGCTATCCTCGCATGGTGTATCTACTAAGTATGATGTGAAATTCTTGAGTGATAATGAGTCCCTTGAACTTTTCCTTCAAAAAGCCTTTAAAGGAGATAAACCTAATGAAGATTATTTGAACCTTGCTAGAACCGTCATTGAATATGCTAGAGGCCTTCCTTTAGCGCTCAAAGTGTTAGGTTCATTTCTTTGCAAAAGAACTATAGTGCAATGGAAGCATGCACTAGCTAAGTTCAAGAAAGTTCCTCCAAATGACATTTTAAAGATACTTCAATCTCTCCAAAGCCTCAAGTCCATTGATCTTTCTTATTTAGAGTACCTCATCAAAACTCCAAATTTTGATAGAATTCCTCATCTTGAAAAATTGATTCTTGAAGGGTGTTCTAACTTGATTGAAATTCACCGATCCCTTGGACAACACAAGAAACTCGTCATTGTTAACTTGAAAGATTGCAGAGAAGTTAAAAACCTTCCAAGGAAATTTGAGATGAATTGCTTAGAGACTTTTGTTCTATCTGGTTGTTCAAGAGTTATAAAACTTCCTGAGTTTGGAAAAGATATGGAACGTCTGTCTAAACTTGATTTAGAGGGGACTGCTATAACAAAACTGTCTCAATCACTGGGCAATTTGATTGGTCTTGTGGAGTTAAATTTGAAGAATTGTAAAAAGCTGGTTTGTCTTCCATGTGATGTTTGTAAATTGAAATCTCTAAAAATGATCAAAATTGCTGGCTGCTCAAAGTTTTCAAGCCTAACAAAGAATTTGAACGAAAAAGAGGCTGTGGAAGTGCTTGATTTGAGAAAAATTGCTATAAAAAGGCTTTCACTTTGTGAATACAATGGTCAAGCACAATCTTCATCATCATGGAGTTGCTTCTCCCTTATTCAAAGGCCTTTGAGCTGTAGGAAATAG 2301 0.3794 MGLKPLEVDSDGNPTFVIGDPMKKVQWVKTSRRIRLILGSAASCFAGSCRIALKDSVCKTRLEFTVLYRCYCQQGLPSIIEEVEDLLDLGEFWCCRQQFWVEGTMKKKGKKIELRLRFQILAMACDVDGVGCSSSSSASTKRWKYDVFLSFRGEDSRKNFTDHLYVALKRKGLRTFRDEEELERGEYINPGLVQAIDESRSAIVVLSPNYASSTWCLDELQKILQLKEELSLQVFPIFYRVDPSDVRKQKGCFAEAFIKYEERFVQDKMKVRKWRDALEKVATISGWDSQNWHETEFIESIAEEIMSKLRDDELPSDLGMLIGIQPKLDELESIVARELGGVGFIGIWGTGGIGKTTLARAFYERKLKNFEIHCFLHNIREAYEKEGLISLQKRLLFSLEKRSMEVCDCYEGMKLIKNMLRNRKVLLVLDDVSDISQLENLAPKQGWFSKGSIIIITTRDKHLLSSHGVSTKYDVKFLSDNESLELFLQKAFKGDKPNEDYLNLARTVIEYARGLPLALKVLGSFLCKRTIVQWKHALAKFKKVPPNDILKILQSLQSLKSIDLSYLEYLIKTPNFDRIPHLEKLILEGCSNLIEIHRSLGQHKKLVIVNLKDCREVKNLPRKFEMNCLETFVLSGCSRVIKLPEFGKDMERLSKLDLEGTAITKLSQSLGNLIGLVELNLKNCKKLVCLPCDVCKLKSLKMIKIAGCSKFSSLTKNLNEKEAVEVLDLRKIAIKRLSLCEYNGQAQSSSSWSCFSLIQRPLSCRK 766
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral5286g00024 766 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 305 554 IPR027417 -
Pral5286g00024 766 Pfam NB-ARC domain 341 545 IPR002182 GO:0043531
Pral5286g00024 766 Gene3D - 309 473 IPR027417 -
Pral5286g00024 766 SUPERFAMILY L domain-like 549 739 - -
Pral5286g00024 766 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 556 708 IPR044974 GO:0006952
Pral5286g00024 766 Gene3D - 137 308 IPR035897 -
Pral5286g00024 766 Pfam TIR domain 144 310 IPR000157 GO:0007165
Pral5286g00024 766 ProSiteProfiles TIR domain profile. 143 309 IPR000157 GO:0007165
Pral5286g00024 766 SUPERFAMILY Toll/Interleukin receptor TIR domain 134 287 IPR035897 -
Pral5286g00024 766 SMART till_3 144 284 IPR000157 GO:0007165
Pral5286g00024 766 Gene3D - 477 559 IPR042197 -
Pral5286g00024 766 Gene3D Ribonuclease Inhibitor 624 750 IPR032675 -
Pral5286g00024 766 PRINTS Disease resistance protein signature 419 433 - -
Pral5286g00024 766 PRINTS Disease resistance protein signature 671 687 - -
Pral5286g00024 766 PRINTS Disease resistance protein signature 512 526 - -
Pral5286g00024 766 PRINTS Disease resistance protein signature 344 359 - -
Pral5286g00024 766 FunFam Disease resistance protein (TIR-NBS-LRR class) 141 311 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral5286g00024 Pral-Chr5286 279269 288697 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral5286g00024 555 737 WRKY Transcription Factor Family AT4G12020 34.426 7.82e-23 103
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral5286g00024 - - pcin:129318967 556.599