Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral5286g00021 ATGCTTCTGCAAAACTTCCCTTTGTTTCCTGAGACGCACAGGGATATTGCTGTGATCATGGAAATCAAAGGGATGTTAGAGTGGGATTGGTCAGTGGATATGCAGGTCTTTCACAGAGACGGCAATGGCATTGCTGATTTACTAGCTAAAAGAGCACTTAATGGAGCAATGGGTCTGGAAATACTGGGCCCTGAGACAATGATGGAAATATTGCAGGCCACTGATGTTACACTCACTGAAGACGGGAAAGATGGAGGTTATATTCAATGCTCGAGATCTCATGACCAGTTCGTTGCTGAAGAAGATGAGTCTATACTTCCAAGATTCCAAATCCTTGTGATGGCGCCTGATGCTGATGGAGTTGGCTGTTCTTCAAGATCTTCTGGTTCAACTAAGAGATGGAAGTATGATGTGTTTTTGAGCTTTCGAGGGGAAGATACCCGGAAAAATTTTACTGATCATTTGTATGCTGCTTTAAAAAACGAAGGATTAAGAACTTTTCGAGATGAGGAAGGACTTGAAAGGGGAGAATCTATTAATCCAAGTTTAGTAGAAGCAATTGAAGAATCTCGTTCTGCAATTATTGTGCTCTCTCCAAATTATGCTTCTTCAACTTGGTGTTTGGATGAGCTTCAAAAGATCCTACAGTTAAAGGAAGAGACAAGTCTTCAAGTATTTCCGATATTTTACGGTGTAGATCCTTCTGATGTTAGGAAACAAAACGGAAGTTTTGCAGAAGCCTTCATAAGGCATGAAGAAAGATTTGTCAAAGACAAAACGCAGGAATGGAGGGATGCTTTACAAGAAGTTGCTACTTTATCTGGTTGGGACTCAAAAAACCGGTATGAAACAGAATTCATTGAAAGCATTGCTGATGAAATCGGGTCAAAGTTACTTGATAAATCAGCATCTGATCTTGGCAAGTTAATTGGAATTGAACCAAAATTAGATGAACTGAATTCAATCATAGCAAGGGAATCAGAAGAAGTTGGATTTATAGGAATATGGGGTGCAGGAGGCGTAGGCAAAACAACTCTTGCTAGAGCCTTTTATGAGCGAGAGCGAAAGCGAAAGAGCAAAAACTTTCACTGCTTCCTTGATAATATTAGAGAGGCATGTGAAAAAGATGGTTTGATTTCGTTGCAAAGAAAACTTCTTTTATCTTTGTACAAAAGGAGTATAGAAGTGGCTGATTTTTATGAAGCAATGGAGTTAATAAAAAGGAAGTTAACCGACAGAGAAATTCTACTTGTCCTTGATGATGTGAGTCATGTTAGCCAACTTGAGAAGTTGGCTCCAAGGCAAGGATGGTTCAGCAAAGGGAGCATAATAGTGATAACAACAAGGGATAAGCATTTGCTATCATCATATGGTGTATCTGATAGTGCCATATATCACATTGAATTCTTGAGTGATAGCAAGTCCCTTAAACTTTTCATTCAAAATGCTTTTAAAGAAGGGCAACCTAATGAAGATTATTTGAACCTTGCTAGAACCGTCATTGAATATACTGGAGGCCTTCCTTTAGCACTCGAAGTGTTAGGTTCATTTCTTTGCAAAAGAACGATAGAGGAATGGGAAGATGCACTAGCTAAGTTCGAGAAATGTCTTCCAGAGGACATTTGCAAGATACTTGAAGTGAGTCTTCACGGATTAGAGCTTAATGAGAAGACTATATTCTTAGATATTGCTTGTTTTTTCAATGGGATGGACGAAGATCATATCATACAAATTTTAGAAACATTGGATAAGGATCTTCACCCAAAAATTGGAATAAGGGTTCTTATTGACAAATCACTAGTAATTAATTATGAAGGGCATTTGCAGGTGCATGAAATTCTGCAAAATATGGCTAAACATGTTGTCTATCAAGAATCATTTGGTGATGCCTGCAAGCTTTCTAGGATATTGTCCTTGGATGATGCCAATCATGTATTAGGAGGAACTAAGGTGACGTTCCAAAGTTCTTGTGTTTGTGCACTCTTATAA 1989 0.3851 MLLQNFPLFPETHRDIAVIMEIKGMLEWDWSVDMQVFHRDGNGIADLLAKRALNGAMGLEILGPETMMEILQATDVTLTEDGKDGGYIQCSRSHDQFVAEEDESILPRFQILVMAPDADGVGCSSRSSGSTKRWKYDVFLSFRGEDTRKNFTDHLYAALKNEGLRTFRDEEGLERGESINPSLVEAIEESRSAIIVLSPNYASSTWCLDELQKILQLKEETSLQVFPIFYGVDPSDVRKQNGSFAEAFIRHEERFVKDKTQEWRDALQEVATLSGWDSKNRYETEFIESIADEIGSKLLDKSASDLGKLIGIEPKLDELNSIIARESEEVGFIGIWGAGGVGKTTLARAFYERERKRKSKNFHCFLDNIREACEKDGLISLQRKLLLSLYKRSIEVADFYEAMELIKRKLTDREILLVLDDVSHVSQLEKLAPRQGWFSKGSIIVITTRDKHLLSSYGVSDSAIYHIEFLSDSKSLKLFIQNAFKEGQPNEDYLNLARTVIEYTGGLPLALEVLGSFLCKRTIEEWEDALAKFEKCLPEDICKILEVSLHGLELNEKTIFLDIACFFNGMDEDHIIQILETLDKDLHPKIGIRVLIDKSLVINYEGHLQVHEILQNMAKHVVYQESFGDACKLSRILSLDDANHVLGGTKVTFQSSCVCALL 662
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral5286g00021 662 Pfam NB-ARC domain 326 538 IPR002182 GO:0043531
Pral5286g00021 662 SMART till_3 135 273 IPR000157 GO:0007165
Pral5286g00021 662 ProSiteProfiles TIR domain profile. 134 298 IPR000157 GO:0007165
Pral5286g00021 662 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 305 563 IPR027417 -
Pral5286g00021 662 SUPERFAMILY "Winged helix" DNA-binding domain 540 645 IPR036390 -
Pral5286g00021 662 Gene3D - 301 464 IPR027417 -
Pral5286g00021 662 SUPERFAMILY Toll/Interleukin receptor TIR domain 125 276 IPR035897 -
Pral5286g00021 662 Gene3D - 129 300 IPR035897 -
Pral5286g00021 662 Pfam TIR domain 135 302 IPR000157 GO:0007165
Pral5286g00021 662 Gene3D - 470 557 IPR042197 -
Pral5286g00021 662 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 136 646 IPR044974 GO:0006952
Pral5286g00021 662 PRINTS Disease resistance protein signature 332 347 - -
Pral5286g00021 662 PRINTS Disease resistance protein signature 504 518 - -
Pral5286g00021 662 PRINTS Disease resistance protein signature 409 423 - -
Pral5286g00021 662 FunFam Disease resistance protein (TIR-NBS-LRR class) 132 300 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral5286g00021 Pral-Chr5286 232147 244234 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral5286g00021 136 646 WRKY Transcription Factor Family AT4G12020 27.660 2.01e-46 176
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral5286g00021 - - pcin:129318967 659.448