Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral5286g00020 ATGGGATACAGGAGAGCTTTTTATGAGCGAAAGCTCAAAAACTTTGAGATTCACTGCTTTCTTCATAATATTAGAGAGGCATATGAAAAAGAAGGTTTGATTTCATTGCAAAAAAGAATTCTTTTTTCTTTAGAGAAAAGAAGTATGGAAGTGTGTGATTGTTATGAAGGAAAGAAGTTGATAAAAAACATGTTGTGCAATAGAAAAGTTCTACTTGTCCTTGATGATGTGAGTGACATTAGCCAACTTGAAAATTTGGCTCCAAAGCAAGGATGGTTCAGCAAAGGGAGTATAATAATAATAACAACCAGGGACAAGCATTTGCTATCCTCGCATGGTGTATCTACTAAGTATGATGTGAAATTCTTGAGTGATAATGAGTCTCTTGAACTTTTCCTTCAAAAAGCCTTTAAAGGAGATAAACCTAATGAAGATTATTTGAACCTTGCTAGAACCGTCATTGAATATGCTAGAGGCCTTCCTTTAGCGCTCAAAGTGTTAGGTTCATTTCTTTGCAAAAGAACTATAGTGCAATGGAAGCATGCACTAGCTAAGTTCAAGAAAGTTCCTCCAAATGACATTTTAAAGATACTTCAAGGGACAGATGCTATTCGGGGAATAATTCTCACATTAGAAAAGTCATGTGATGCATTTTGGGATCCTGAAGCCTTCTCAAAAATGAGTAATCTCAAGTTACTTATCATTTCAAATTGCTCACATGTTTTACGTTTTCAATTGAATCTTCCTTATGGACTCAAGGCCCTTTCCAAAGAGTTGAAAGTGATAATATGGGAGAGGTATCCATTATTTTACTTGCCAAGTCAGCCTCAACTCCATCAACTTGTTGGACTAATAATGCGCCATAGCAAGTTAAAAGAACTTTGGAGCGGAAGACCGTCTCTCCAAAGCCTCAAGTCCATTGATCTTTCTTATTCAGAGTACCTCATCAAAACTCCAAATTTTGATGGAATTCCTCATCTTGAAAAATTGATTCTTGAAGGGTGTTCTAACTTGATTGAAATTCACCAATCCCTTGGACAACACAAGAAACTCGTCATTGTTAACTTGAAAGATTGCAGAGAAGTTAAAAACCTTCCAAGGAAATTTGAGATGAATTGCTTAGAGACTTTTGTTCTATCTGGTTGTTCAAGAGTTATAAAACTTCCTGAGTTTGAAAAAGATATGGAACGTCTGTCTAAACTTGATTTAGAGGGGACTGCTATAACAAAACTGTCTCAATCACTGGGCAATTTGATTGGTCTTGTGGAGTTAAATTTGAAGAATTGTAAAAAGCTGGTTTGTCTTCCATGTGATGTTTGTAAATTGAAATCTCTGAAAATGATCAAAATTGCTGGCTGCTCAAAGTTTTCAAGCCTACCAAAGAATTTGAACGAAAAAGAGGCTGTGGAAGTGCTTGATTTGAGAAAAATTGCTATAAAAAGGCTTTCACTTTGTGAATACAATGGTGAAGCACAATCTTCATCATCATGGAGTTGCTTCTCCCTTATTCAATGGCCTTTGAGCTCAACAAATTTTATGTTATCATATCGCTATCTTTGTCATACTTGA 1569 0.3569 MGYRRAFYERKLKNFEIHCFLHNIREAYEKEGLISLQKRILFSLEKRSMEVCDCYEGKKLIKNMLCNRKVLLVLDDVSDISQLENLAPKQGWFSKGSIIIITTRDKHLLSSHGVSTKYDVKFLSDNESLELFLQKAFKGDKPNEDYLNLARTVIEYARGLPLALKVLGSFLCKRTIVQWKHALAKFKKVPPNDILKILQGTDAIRGIILTLEKSCDAFWDPEAFSKMSNLKLLIISNCSHVLRFQLNLPYGLKALSKELKVIIWERYPLFYLPSQPQLHQLVGLIMRHSKLKELWSGRPSLQSLKSIDLSYSEYLIKTPNFDGIPHLEKLILEGCSNLIEIHQSLGQHKKLVIVNLKDCREVKNLPRKFEMNCLETFVLSGCSRVIKLPEFEKDMERLSKLDLEGTAITKLSQSLGNLIGLVELNLKNCKKLVCLPCDVCKLKSLKMIKIAGCSKFSSLPKNLNEKEAVEVLDLRKIAIKRLSLCEYNGEAQSSSSWSCFSLIQWPLSSTNFMLSYRYLCHT 522
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral5286g00020 522 Gene3D - 122 201 IPR042197 -
Pral5286g00020 522 PRINTS Disease resistance protein signature 157 171 - -
Pral5286g00020 522 PRINTS Disease resistance protein signature 64 78 - -
Pral5286g00020 522 PRINTS Disease resistance protein signature 299 315 - -
Pral5286g00020 522 Gene3D Ribonuclease Inhibitor 214 388 IPR032675 -
Pral5286g00020 522 SUPERFAMILY L domain-like 209 483 - -
Pral5286g00020 522 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 6 199 IPR027417 -
Pral5286g00020 522 Gene3D - 4 117 IPR027417 -
Pral5286g00020 522 Pfam NB-ARC domain 35 188 IPR002182 GO:0043531
Pral5286g00020 522 Gene3D Ribonuclease Inhibitor 389 515 IPR032675 -
Pral5286g00020 522 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 205 390 IPR044974 GO:0006952
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral5286g00020 Pral-Chr5286 223060 225165 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral5286g00020 200 482 WRKY Transcription Factor Family AT4G12020 35.616 9.05e-39 150
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral5286g00020 - - pcin:129317383 451.825