Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral5286g00006 ATGGCAGATATTGTGATATCAATCGGGTCAAAGCTTGCAGAATATTTAGTGGCTCCAATTTCACAAGGAGCTACTTATTTGTTCTGTTTCAAGCAGTTCATTGGAGGTGTTGAGAAAGCAAAACAAGAGCTGGAGGTGAAATTAGAAGACGTGAAAAAGCGCAAGGAAGAAGCTGATCGAGAAACTGAAGAAATAATGCCATCCGTGAAGAAGTGGTTGGATGATGTGAATGCAATCCTAGAAGAGGTGCAAAAGCTGCAACAAGAGCTTGAAGGGGGACCGAACAAGTGTTTTAATGTGTCACTCAGATATTCTTTAGCAAAACGGATGGAAAATAAGGCTAAGCAAATGACAGATCTCAAACAAAATTCCAGCTTTGAGCCATTTTCCCAACTGATCCAACTTCCTGGCATTACTTACTTCTCTTCCAAAGAGTTTATGGCTTTCAACTCAAGGAAATCAACTTATAATCGTCTTTTAGAGGCAATTATAAATGGCAAAAACAAAATGGTGGGACTATATGGTATAGCGGGCTCAGGCAAAACCACTTTGGCAAAAGAAGTGGGCAAGAAAGTGGATGAATTGAAGCTTTTTGACAAGGTCATCATGGTAGTTGTTTCTAAACCCCCAAATATTCTGAACATTCAGCAGGAAATAGCAGGGCAAATAGGCTTGCAACTTCAAGAGCCAACTCAACTTACTAAAGCACAAAGGCTATCAGAAGGATTGAAAAATAAGAAGATTCTTATAATCCTGGATGATGTGTGGAGCAAACTAAGGCTTGAAGATATTGGAATTCCAACCACTGGAGGTTGTCATATCTTGTTGACCACTCGCCTTCGAGATGTATGTGTCTCTATGGATTGTGAGAGTAAAATTGAGTTGTCTCTCTTAACAGAGGAAGAGGCATGGGCTTTGTTCAAGATGCATGTTAACACAACCAGTGTGTCAACGAATGAGTCCGATAGCATCGGAAGGAAGATTGTTGATGAGTGTAAGGGTTTGCCTATAGCAATTGTAACAGTTGGAAGCACATTAAAAGAAAAGAGTATTCATACGTGGAGATCAACACTAGAAAGGCTACGACATCCCCCACCACTGGATATTGAAGATGATTTGAAGACCCCTTATGTAACTCTCAAAGTAAGTTATGATAATTTGCCGAGTCCGTTAGCTAAGTCGCTCTTCATATTGTGCTCTATGTTTCCTGAGGATCATGAAATCCATATAGAGGATTTAATTCGTTTTGGCAAAGGGATCTCTTAA 1266 0.3989 MADIVISIGSKLAEYLVAPISQGATYLFCFKQFIGGVEKAKQELEVKLEDVKKRKEEADRETEEIMPSVKKWLDDVNAILEEVQKLQQELEGGPNKCFNVSLRYSLAKRMENKAKQMTDLKQNSSFEPFSQLIQLPGITYFSSKEFMAFNSRKSTYNRLLEAIINGKNKMVGLYGIAGSGKTTLAKEVGKKVDELKLFDKVIMVVVSKPPNILNIQQEIAGQIGLQLQEPTQLTKAQRLSEGLKNKKILIILDDVWSKLRLEDIGIPTTGGCHILLTTRLRDVCVSMDCESKIELSLLTEEEAWALFKMHVNTTSVSTNESDSIGRKIVDECKGLPIAIVTVGSTLKEKSIHTWRSTLERLRHPPPLDIEDDLKTPYVTLKVSYDNLPSPLAKSLFILCSMFPEDHEIHIEDLIRFGKGIS 421
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral5286g00006 421 Coils Coil 69 89 - -
Pral5286g00006 421 Coils Coil 34 61 - -
Pral5286g00006 421 Gene3D - 142 295 IPR027417 -
Pral5286g00006 421 SMART AAA_5 167 297 IPR003593 GO:0016887
Pral5286g00006 421 FunFam Probable disease resistance protein At1g61300 143 292 - -
Pral5286g00006 421 PANTHER NB-ARC DOMAIN-CONTAINING PROTEIN-RELATED 37 417 - -
Pral5286g00006 421 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 142 399 IPR027417 -
Pral5286g00006 421 Gene3D - 297 387 IPR042197 -
Pral5286g00006 421 Pfam NB-ARC domain 156 386 IPR002182 GO:0043531
Pral5286g00006 421 PRINTS Disease resistance protein signature 170 185 - -
Pral5286g00006 421 PRINTS Disease resistance protein signature 242 256 - -
Pral5286g00006 421 PRINTS Disease resistance protein signature 332 346 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral5286g00006 Pral-Chr5286 112911 114176 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral5286g00006 152 380 WRKY Transcription Factor Family AT5G45050 28.049 9.06e-10 58.9
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral5286g00006 - - pcin:129306241 555.829