Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral5286g00004 ATGGCAGAGATTGTGATCTCAATCGGGTCAAAGGTTGCAGAATGCTTGGTGGGTCCGATTTCACAAGGAGTTGCTCATTTGTTCTGCTTTAGGAAATTTAATGAAGACTTTGAGAAAGCAAGACGAGAGCTGGAGGTGAAACTAGAAGACGTGAGAAACCGTAAGGAAGAAGCTGATCGAAAAAATGAAGACATAATGCCAGCCGTGGAGAAGTGGTTGGATGATGTGAATGCTATCCTACAAGAGGCGGAAAAGCTGCAACCAGAGCTTGATCGAGGACGAAACAATTGTTTCAATGTGTCAGTTAGATACTCATTATCCAAACAAATGGAAAATAAGGCTAAACAGATGACGGATCTCAAACAAAAGTCTGACTTTCCGGTATTTGCCCAGTTGAGGCAACTTCCTGGCTTGACTGGCTTCCCTTCCAAAGACTTTATGGATTTCAATTCAAGGAAGTCAACTTATAATCATCTTTTGGAGGCAATTAAAGATGGCACAAACAAGATGGTGGGTTTATATGGTATGGCAGGATCAGGCAAAACCACTTTGGCAGAAGAAGTGGGCAAGAAATTAAATGAGCTGAAGCTTTTTGACAAGGTCATCATCGTAGTCATTTCGAAACCCCCAAATATTTTGAACATTCAGCAACAAATAGCGGAGATAATAGGCTTGCAACTTCAAGAGAAAACTCAGTCTGCGAGAGCACAAAGGCTATTAGAAGGATTGAAAAATAAGAAGATTCTTATAATATTGGATGATGTCTGGGAGTGTCTAAGGCTTGAAGATATTGGCATTTCACTCGTTGAAGGTTGCCATGTGTTGTTAACCACTCGTCTTCGGAATATTTGTGTCTCTATGGATTGTGAGCCTTTGATTGAACTCCCTTTGATAACTAAGGAGGAGGCATGGGAATTATTCAAGAAGCATGCGAACCTGCGCAATGATCCCTCAAATAAGTTTGATGATGTGGGAAGGAAAATCATTGATGAGTGCAAGGAGCTACCTATTGCAATTGTTGTAGCTGGAAGATCCTTAAAGGAAAAACGTATTGAAGCGTGGGAGTTGACCCTAGGGAGACTAAAACAATTCCAACCAATGGATGTTGAACCAGGTTTGAGAAGCCCTTATGCTTGTCTCGAATTGAGTTATGATAGTTTGCCAAATCTAACAGCCAAGTCGCTCTACTTATTATGCTCTATGTTCCCTGAAGATCATAAAATCCATAAAGAGGACTTAATTCGATTTGGCAAGAGAACACTTGAGCTAGAGGAGACTACTGACACAATCGAGGATGTGAGGCGACAGATTTTAGTAGCTCTTGACATCTTGTTAGATTCTTGTTTGTTAATAAGTACGGATAAGGAAGCCTGTGTAAAAATGCATGACTTAGTTCGAGATGTAGCTTTGTGGATTGCAAAGAAGCAATGTCAACCAATTTTGGTTGATAGCAATGCAGTTTCAAACATGTTGGTTAGAAACCACCAAAGTCTGAAAGATGTAAAGACACTCTCATTGTGGGATTTGGATGTGGATTATTTCAAGCGCTTTAACCAATTGTGTTGTCCAACACTTGAGATTCTGCTCCTTCAACCCCATGGGTTCATCGATGACGTTGGAGCAATGGAAGCACTAAAAGTCTTGGCGTTCATACAATATGGCTTTAATTGGAAACCTTGGCGGGTTGATTATTGTTCAGTTCCGCAATCAATTGTATCATTAACAAATCTTCACACCTTATGTCTTAGAGGGAAAATATTGGGTGACATATCTCTTTTGGGTGAACTTAAAGGATTAGAGATTCTTGACCTACGTGGTTCCTTATTTGTTGAATTACCTGCTGGAATTGTAGAAATGAAAATGTTGAAACTTTTGGATATATATGGTTGCCAAATTGAGAAAAGCCCTTTAGAAGTAATTGGAAGATGTGAGCAGCTTGAAGAATTATACTTTTGGGACAAAAAATCTGTCATCCCAAAAAAAATTTCTCCGTCAAGGTTGAAGAGGTATGTTATTTATGATTCCACATGCAGTATAATGTCTCCATTTGATCATGATCCTTTTGAAAAATATTTGGATAGTTGCGGTGAAACATTAAGAGCTTTATGTATAGAAGGCTTCAAGGTCTCTGATTTGAATTCATCAATGAAAGATCTCATTTTTAGGGCAAACCACCTTTGGCTAGATAATGTGAGGTGGGATCATAGAGATATAAATTTTCAGATAAAGCACTTAGGGGTATCGTGTTGTCAAGATCAAAGATTCATCATCGAGAACCTTGATATGAACATGCTTCAAACACAACAAGTGTTCTCACACTTAATTACTTTAAGGTTGTTTGAAATGAATAGTCTTGAGCAAGTGTTCCAAGATTCATCTATCAGCTACTTTCTCCCCATGTTACAAGAGCTATGGATACAGAGCTGTCCTGAATTGAGAACTTGCATCTTCTCACATGCCACAATTATGAGCTTGCCAAAGTTGAGAAAACTTCAGTTTCATAGGTGCATCAAAGTGAAATGGCTATTGTCTTGTTCTCTGGCTTTTCATTGTCCTTTACTAGAGGAAATTATTATACGCTATTGCTCTGAACTTGAGAGGTTCATTGATGAAGGAGTTGCCGATGGGGGTCCACGACTTCATGATAAGCAATATTATCCACATGTAAGTATTATTCGCAAAATCCCTCATGAATCACTGCATAAGAAATAA 2712 0.389 MAEIVISIGSKVAECLVGPISQGVAHLFCFRKFNEDFEKARRELEVKLEDVRNRKEEADRKNEDIMPAVEKWLDDVNAILQEAEKLQPELDRGRNNCFNVSVRYSLSKQMENKAKQMTDLKQKSDFPVFAQLRQLPGLTGFPSKDFMDFNSRKSTYNHLLEAIKDGTNKMVGLYGMAGSGKTTLAEEVGKKLNELKLFDKVIIVVISKPPNILNIQQQIAEIIGLQLQEKTQSARAQRLLEGLKNKKILIILDDVWECLRLEDIGISLVEGCHVLLTTRLRNICVSMDCEPLIELPLITKEEAWELFKKHANLRNDPSNKFDDVGRKIIDECKELPIAIVVAGRSLKEKRIEAWELTLGRLKQFQPMDVEPGLRSPYACLELSYDSLPNLTAKSLYLLCSMFPEDHKIHKEDLIRFGKRTLELEETTDTIEDVRRQILVALDILLDSCLLISTDKEACVKMHDLVRDVALWIAKKQCQPILVDSNAVSNMLVRNHQSLKDVKTLSLWDLDVDYFKRFNQLCCPTLEILLLQPHGFIDDVGAMEALKVLAFIQYGFNWKPWRVDYCSVPQSIVSLTNLHTLCLRGKILGDISLLGELKGLEILDLRGSLFVELPAGIVEMKMLKLLDIYGCQIEKSPLEVIGRCEQLEELYFWDKKSVIPKKISPSRLKRYVIYDSTCSIMSPFDHDPFEKYLDSCGETLRALCIEGFKVSDLNSSMKDLIFRANHLWLDNVRWDHRDINFQIKHLGVSCCQDQRFIIENLDMNMLQTQQVFSHLITLRLFEMNSLEQVFQDSSISYFLPMLQELWIQSCPELRTCIFSHATIMSLPKLRKLQFHRCIKVKWLLSCSLAFHCPLLEEIIIRYCSELERFIDEGVADGGPRLHDKQYYPHVSIIRKIPHESLHKK 903
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral5286g00004 903 SUPERFAMILY L domain-like 460 865 - -
Pral5286g00004 903 Gene3D - 384 470 IPR036388 -
Pral5286g00004 903 Pfam NB-ARC domain 157 367 IPR002182 GO:0043531
Pral5286g00004 903 Gene3D Ribonuclease Inhibitor 688 873 IPR032675 -
Pral5286g00004 903 FunFam Probable disease resistance protein At1g61300 148 291 - -
Pral5286g00004 903 SMART AAA_5 167 308 IPR003593 GO:0016887
Pral5286g00004 903 PRINTS Disease resistance protein signature 594 610 - -
Pral5286g00004 903 PRINTS Disease resistance protein signature 170 185 - -
Pral5286g00004 903 PRINTS Disease resistance protein signature 332 346 - -
Pral5286g00004 903 PRINTS Disease resistance protein signature 242 256 - -
Pral5286g00004 903 PANTHER NB-ARC DOMAIN-CONTAINING PROTEIN-RELATED 31 869 - -
Pral5286g00004 903 Coils Coil 34 61 - -
Pral5286g00004 903 Gene3D - 298 383 IPR042197 -
Pral5286g00004 903 Gene3D - 138 291 IPR027417 -
Pral5286g00004 903 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 138 399 IPR027417 -
Pral5286g00004 903 Gene3D Ribonuclease Inhibitor 475 671 IPR032675 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral5286g00004 Pral-Chr5286 61806 64517 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral5286g00004 152 478 WRKY Transcription Factor Family AT5G45050 24.058 5.31e-09 58.5
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral5286g00004 - - pcin:129306241 1014.6