Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral5286g00002 ATGCCATCCGTGAAGAAGTGGTTGGACGATGTGAATGCAATCCTAGAAGAGGTGCAAAAGTTGCAACAAGAGCTTGAAGGAGGACCAAACAAGTGTTTTAATGTGTCACTCAGATATTCTTTAGCAAAACGAATGGAAAATAAGGCTAAGCAAATGACAGATCTCAAACAAAATTCCAGCTTTGAGCCATTTTCCCAACTGATCCAACTTCCTGGCATTACTTACTTCTCTTCCAAAGAGTTTATGGCTTTCAACTCAAGGAAATCAACTTATAATCGTCTTTTGGAGGCAATTATAAATGGCAAAAACAAGATGGTGGGACTATATGGTATAGGGGGCTCAGGCAAAACCACTTTGGCAAAAGAAGTGGGCAAGAAAGTGGATGAGTTGAAGCTTTTTGACAAGGTCATCATGGTAGTTGTTTCTAAACCCCTAAATATTATGAACATTCAGCAGGAAATAGCAGGGCAAATAGGCTTACAACTTCAAGAGCCAACTCAACTTACTAAAGCACAAAGGCTATCAGAAGGATTGAAAAATAAGAAGATTCTTATAATCCTGGATGATGTGTGGAGCAAACTAAAGCTTGAAGATATTGGAATTCCAACCACTGGAGGTTGTCATATCTTGTTGACCACTCGCCTTCGATATGTATGCGTCTCTATGGATTGTGAGAGTAAAATTGAGTTGTTACTCTTAACAGAGGAAGAGGCATGGGCTTTGTTCAAGATGCATGCTAACACAACTAGTGTGTCAACGAATGAGTTTGATAGCATCGGAAGGAAGATTGTTGATGAGTGTAAGGGTTTGCCTATAGCAATTGTAACAGTTGGAAGCACATTAAAAGAAAAGAGTATTCATACGTGGAGATCAACATTAGAAAGGCTACGACATCCCCCACCACTGGATATTGAAGATGATTTGAAGACCCCTTATGTAACTCTCAAAGTAAGTTATGATAATTTGTCGAGTCCGCTAGCTAAGTCACTCTTCATATTGTGCTCTATGTTTCCTGAGGATCATGAAATCCATATAGAGGATTTAATTCGTTTTGGCAAAGGGACTCTTAAGCTTGGTGAAAGAATTTACACAATGGAGAAAACAAGGGATAGGGTTTTAGCCAACATTGAGAAATTGTTAGATTCTTGTTTGTTAATGTATACCAGTAAGCAGGCACATGTAAAATTGCATGATGTGGTTCGAGATGTAGCCTTGTGGACTGCAAAGGAGAAGTGTCAAGAAGTTCTGGTGGACAACCAAGAAATTTCAGAGATGTTAATTGGTAAATACCAAAGTTTGGAAGATACAAAGGCAGTGTCATTGTGGAATTTGGATAAGCATCTAGAGCTCTCTAAACAATTGCATTTTCCAAAACTTGAGATTCTACTACTTCAACCATATGGGTTCATTCGAGATATTGAAGCAATGGAGTCACTCAAAGTCTTGGCACTCGTAAGACATGGATTTGAGTGGGAATTGCGGAGGCGGGATCTAAATTTTTGTTTAATTCCACAATCAATTGTATCATTAACTAATCTTCACACCTTATGCCTTAGGGGGAAAATTTTGGGGGACGTATCTCTTTTGGGTGAACTTAAAGGATTGGAGATTCTTGACTTACGTGGTTCTCTATTTGATGAATTACCTATTGGAATTGTAGATATGAAAATGCTGAAACTTTTGGATATATTTGGTTGTCAAATTGAGAAAAGCCCTTTAGAAGTAATTGGAAGATGTGAGCAGCTTGAAGAATTATACTTTTGGGACCACAAATCTGTCATCCTCGAAATTCTCTCTCTGTCAAATTTGAAGAGTCTTGAACAAGTGTTTCAAGATTCATCTATTGGCTGCTCTCTCCCCATGTTACAAGAGCTATGGATATGGAGTTGTCCTGAATTGAGAATTTGTATCTTCTCACATGCCACCATTACGAGCCTGCCAAAGCTGAGAAAACTTCATATTGGCAACTATGACAAAGTGAAATGGCTACTGTCTTGTTCCCTAGCTTCTTATTGTCCTTTACTGAAGGAAATAATTATAAGCCATTGCTCTGAATTTGAGAGGCTCATTGATGAAAAAGCTGCACATGGGGATCCACTACTTCATGATAAGCAATATTATCCATATGGAAAGGAAACTGACAGTGCTTATGTAGGCGTTATAGCAAAAAGATTCAATCAGTTGCAAAATGAGCAATCCTTGATCCTTTTTCTAAGATTGAAAAGTCTACAAATTGTAAGGAGTGGAAAAAAGAAAGAGGATATAAGTATATCCAGTTGCTCTGAATTTGAGGGGCTGATTGATGAAGAAGCTGCACATGGGGATCCACTAGTTCATGATATGCAAGATCATCCACAGCAACCTTTGATCCGAAATTGTTCTGAACTTGAGAGGCTTGCTGAAGAAGCATCATATGGGGATCGGCTACCACTTCTCAAACTGAAGTACTTAAGCTTGCGACACGAGCAGCTCACTCCTTCTCCATCAAAGAAAGAATTCCCCTATGGATTCCGTTACAGAACCCCTTCATCTCCTTCCCCTTCAAACGCCGAGCTAGAATCCCAGAGTCTGTTTCTATGA 2580 0.3907 MPSVKKWLDDVNAILEEVQKLQQELEGGPNKCFNVSLRYSLAKRMENKAKQMTDLKQNSSFEPFSQLIQLPGITYFSSKEFMAFNSRKSTYNRLLEAIINGKNKMVGLYGIGGSGKTTLAKEVGKKVDELKLFDKVIMVVVSKPLNIMNIQQEIAGQIGLQLQEPTQLTKAQRLSEGLKNKKILIILDDVWSKLKLEDIGIPTTGGCHILLTTRLRYVCVSMDCESKIELLLLTEEEAWALFKMHANTTSVSTNEFDSIGRKIVDECKGLPIAIVTVGSTLKEKSIHTWRSTLERLRHPPPLDIEDDLKTPYVTLKVSYDNLSSPLAKSLFILCSMFPEDHEIHIEDLIRFGKGTLKLGERIYTMEKTRDRVLANIEKLLDSCLLMYTSKQAHVKLHDVVRDVALWTAKEKCQEVLVDNQEISEMLIGKYQSLEDTKAVSLWNLDKHLELSKQLHFPKLEILLLQPYGFIRDIEAMESLKVLALVRHGFEWELRRRDLNFCLIPQSIVSLTNLHTLCLRGKILGDVSLLGELKGLEILDLRGSLFDELPIGIVDMKMLKLLDIFGCQIEKSPLEVIGRCEQLEELYFWDHKSVILEILSLSNLKSLEQVFQDSSIGCSLPMLQELWIWSCPELRICIFSHATITSLPKLRKLHIGNYDKVKWLLSCSLASYCPLLKEIIISHCSEFERLIDEKAAHGDPLLHDKQYYPYGKETDSAYVGVIAKRFNQLQNEQSLILFLRLKSLQIVRSGKKKEDISISSCSEFEGLIDEEAAHGDPLVHDMQDHPQQPLIRNCSELERLAEEASYGDRLPLLKLKYLSLRHEQLTPSPSKKEFPYGFRYRTPSSPSPSNAELESQSLFL 859
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral5286g00002 859 MobiDBLite consensus disorder prediction 841 859 - -
Pral5286g00002 859 Coils Coil 4 24 - -
Pral5286g00002 859 Gene3D Ribonuclease Inhibitor 406 596 IPR032675 -
Pral5286g00002 859 Gene3D - 232 318 IPR042197 -
Pral5286g00002 859 Gene3D - 319 405 IPR036388 -
Pral5286g00002 859 FunFam Probable disease resistance protein At1g61300 79 227 - -
Pral5286g00002 859 MobiDBLite consensus disorder prediction 826 859 - -
Pral5286g00002 859 Gene3D - 77 230 IPR027417 -
Pral5286g00002 859 SMART AAA_5 102 235 IPR003593 GO:0016887
Pral5286g00002 859 PRINTS Disease resistance protein signature 553 569 - -
Pral5286g00002 859 PRINTS Disease resistance protein signature 105 120 - -
Pral5286g00002 859 PRINTS Disease resistance protein signature 267 281 - -
Pral5286g00002 859 PRINTS Disease resistance protein signature 177 191 - -
Pral5286g00002 859 SUPERFAMILY L domain-like 396 696 - -
Pral5286g00002 859 Gene3D Ribonuclease Inhibitor 597 696 IPR032675 -
Pral5286g00002 859 PANTHER NB-ARC DOMAIN-CONTAINING PROTEIN-RELATED 3 780 - -
Pral5286g00002 859 Pfam NB-ARC domain 91 321 IPR002182 GO:0043531
Pral5286g00002 859 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 77 334 IPR027417 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral5286g00002 Pral-Chr5286 11529 27149 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral5286g00002 87 322 WRKY Transcription Factor Family AT5G45050 27.381 5.09e-10 61.6
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral5286g00002 - - pcin:129306241 766.533