Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral5286g00001 ATGGCAGAGATTGTGATATCAATCGGGTCAAAGCTTGCAGAATATTTGGTGGCTCCAATTTCACAAGGAGCTACTTATTTGTTTTGCTTCAAGCAGTTCATTGGAGGTGTTGAGAAAGCAAAACAAGAGCTGGAGGCAAAACTAGAAGACGTGAAAAAGCGTAAAGAAGAAGCTGATCGAAAAACTGAAGAAATAATGCCATCCGTGAAGAAGTGGTTGGACGATGTGAATGCAATCCTAGAAGAGGTGCAAAAGCTGCAACAAGAGCTTGAAGGAGGACCAAACAAGTGTTTTAATGTGTCACTCAGATATTCTTTAGCAAAACGAATGGAAAATAAAGCTAAGCAAATGACAGATCTCAAACAAAATTCTAGCTTTGAGCCATTTTCCCAACTGATCCAACTTCCTGGCATTACTTACTTCTCTTCCAAAGAGTTTATGGCTTTCAACTCAAGGAAATCAACTTATAATCGTCTTTTGGAGGCAATTATAAATGGCAAAAACAAGATGGTGGGACTATATGGTATAGGGGGCTCAGGCAAAACCACTTGGGCAAAAGAAGTGGGCAAGAAAGTGGATGAGCTGAAGCTTTTTGACAAGGTCATCATGGTAGTTGTTTCTAAACCCCTAAATATTCTGAACATTCAGCAGGAAATAGCAGGGCAAATAGGCTTACAACTTCAAGAGCCAACTCAACTTACTAAAGCACAAAGGCTGTCAGAAGGATTGAAAAATAAGAAGATTCTTATAATCCTGGATGATGTGTGGAGCAAACTAAAGCTTGAAGATATTGGAATTCCAACCACTGGAGGTTGTCATATCTTGTTGACCACTCGCCTTCGAGATGTATGTGTCTCTATGGATTGTGAGAGTAAAATTGAGTTGTCTCTCTTAACAGAGGAAGAGGCATGGGCTTTGTTCAAGATGCATGCTAACACAACTAGTGTGTCAACGAATGAGTTCGATAGCATCGGAAGGAAGATTGTTGATGAGTGTAAGGGTTTGCCTATAGCAATTGTAACAGTTGGAAGCACATTAAAAGAAAAGAGTATTCATACGTGGAGATCAACATTAGAAAGGCTACGACATCCCCCACCACTGGATATTGAAGATGATTTGAAGACCCCTTATGTAACTCTCAAAGTAAGTTATGATAATTTGTCGAGTCCGCTAGCTAAGTCGCTCTTCATATTGTGCTCTATGTTTCCTGAGGATCATGAAATCCATATAGAGGATTTAATTCGTTTTGGCAAAGGGACTCTTAAGCTTGGTGAAAGAATTTACACAATGGAGAAAACAAGGAATAGGGTTTTAGCTAACATTGAGAAATTGTTAGATTCTTCTTTGTTAATGCATACCAGTAAGCAGGCACATGTAAAATTGCATGATGTGGTTCGAGATGTAGCCTTGTGGATTGCAAAGGAGCAATGTCAAGAAGTTCTGGTGGACAACCAAGAAATTTCAGAGATGTTAATTGGTAACCACCAAAGTTTGGAAGATACAAAGGCAGTGTCATTGTGGAATTTGGATGAGGATCTCGAGCTCTCTAAACAATTGCATTTTCCAAAACTTGAGATTCTACTACTTCAACCATATGGGTTCATTCGAGATATTGGAGCAATGGAGTCACTCAAAGTCTTGGCACTCATAAGACATGGATTTGAGTGGGAATTGCGGAGGTGGGATCCAACTTTTTGTTCAATTCCACAATCAATTGTATCATTAACTAATCTTCACACCTTATGCCTTAGAGGGAAAAATTTGGGGGACATATCTCTTTTGGGTGAACTTAAAGGATTGGAGATTCTTGACTTACGTGGTTCTCGATTTGATGAATTACCTACTGGAATTGTAGATATGAAAATGCTGAAACTTTTGGATATATTTGGTTGTCAAATTGAGAAAAGCCCTTTAGAAGTAATTGGAAGATGTGAGCAGCTTGAAGAATTATACTTTTGGACGACAAATCTGTCATCCCAGAAATTCTCTCTCTTTCAAATTTGA 2004 0.3882 MAEIVISIGSKLAEYLVAPISQGATYLFCFKQFIGGVEKAKQELEAKLEDVKKRKEEADRKTEEIMPSVKKWLDDVNAILEEVQKLQQELEGGPNKCFNVSLRYSLAKRMENKAKQMTDLKQNSSFEPFSQLIQLPGITYFSSKEFMAFNSRKSTYNRLLEAIINGKNKMVGLYGIGGSGKTTWAKEVGKKVDELKLFDKVIMVVVSKPLNILNIQQEIAGQIGLQLQEPTQLTKAQRLSEGLKNKKILIILDDVWSKLKLEDIGIPTTGGCHILLTTRLRDVCVSMDCESKIELSLLTEEEAWALFKMHANTTSVSTNEFDSIGRKIVDECKGLPIAIVTVGSTLKEKSIHTWRSTLERLRHPPPLDIEDDLKTPYVTLKVSYDNLSSPLAKSLFILCSMFPEDHEIHIEDLIRFGKGTLKLGERIYTMEKTRNRVLANIEKLLDSSLLMHTSKQAHVKLHDVVRDVALWIAKEQCQEVLVDNQEISEMLIGNHQSLEDTKAVSLWNLDEDLELSKQLHFPKLEILLLQPYGFIRDIGAMESLKVLALIRHGFEWELRRWDPTFCSIPQSIVSLTNLHTLCLRGKNLGDISLLGELKGLEILDLRGSRFDELPTGIVDMKMLKLLDIFGCQIEKSPLEVIGRCEQLEELYFWTTNLSSQKFSLFQI 667
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral5286g00001 667 Coils Coil 69 89 - -
Pral5286g00001 667 Pfam NB-ARC domain 156 386 IPR002182 GO:0043531
Pral5286g00001 667 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 142 399 IPR027417 -
Pral5286g00001 667 PANTHER NB-ARC DOMAIN-CONTAINING PROTEIN-RELATED 37 656 - -
Pral5286g00001 667 PRINTS Disease resistance protein signature 242 256 - -
Pral5286g00001 667 PRINTS Disease resistance protein signature 595 611 - -
Pral5286g00001 667 PRINTS Disease resistance protein signature 332 346 - -
Pral5286g00001 667 PRINTS Disease resistance protein signature 170 185 - -
Pral5286g00001 667 Coils Coil 34 64 - -
Pral5286g00001 667 Gene3D - 142 295 IPR027417 -
Pral5286g00001 667 Gene3D - 384 470 IPR036388 -
Pral5286g00001 667 Gene3D - 297 383 IPR042197 -
Pral5286g00001 667 FunFam Probable disease resistance protein At1g61300 144 292 - -
Pral5286g00001 667 SUPERFAMILY L domain-like 461 659 - -
Pral5286g00001 667 Gene3D Ribonuclease Inhibitor 473 666 IPR032675 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral5286g00001 Pral-Chr5286 2592 4595 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral5286g00001 152 381 WRKY Transcription Factor Family AT5G45050 27.935 4.10e-10 61.2
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral5286g00001 - - pcin:129306241 837.025