Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral5285g00009 ATGACTTGTTCTTCCACCACCACCGTCTCCAAATGCACTGTCTACCCTAGCCAGCCCTCCTCCCTGGAATCCCTCAAGCTCTCCGTCTCCGACCTCCCCATGCTCTCTTGCCACTACATCCAAAAGGGCATCCTCCTCCCTCCCCCTCCTTTCTCCTTCCCTGACCTTCTCCTCTCTCTTAAGCGCTCTCTTTCTATTACTCTCTCCTTTTTCCCTCCCCTTGCCGGTCGTCTTTTCACCGATTCCGACGGGTATGTCCATATTCAATGCAACGACGCCGGCGTCGAATTCATCCATGCCTCCGCCAAACACCTTGCCACTCACTCCATCCTTTACTCTCCCACACTCACTGACGTCCCTGGCTGCTTCAAGGAGTTCTTCGCTCACAGCAAGACTATCTCCTACACTGGACACACTCTCCCCCTCGTCGCCGTCCAAGTCACTGAGCTTGCTGATGCGGTTTTCATCGGATGCACTGTTAATCATGCCATCGTCGACGGCAATTCCCTCTGGCATTTCTTCAACACCTTCGCTGAGATCTGCAGAGGAGCGAAAATTTCCAAATTCCCCGAATTCACTCGAGATACCGTTTTCAACTCCTCCGCCGTGCTTAAAGTCCCCGCCGGCGGCCCCAAGGTCACCTTCGACGACGAACAGCCGCTGAGGGAAAGAGTATTCCATTTCAGCAGGGAGGCAATTCAAAAACTTAAGCTCACAGCTAATCAGTATGGCGGGAACGGTGTCACGGATTCTACAGAGTTCGTTGAAAAGAAAGTTAACGGGGAGATAACGACCGTCACGGCGAACGGGACCGCCCACAAGACGGAAGAGATTTCGTCGTTTCAATCATTATCAGCACAGCTGTGGCGTTCGGTGACACGTGCGAGGAAGTTGGACCCACGCAAAATGTCGACGTTTCGCATGGCGGTGAACTGCCGCCGACGTCTGGAGCCGAAGATGGACGCTTATTACTTCGGGAACGCGATACAGAGCATCCCGACCGTTGCCGAAGTCGGGGAGATTCTGTCTCGGGATCTACGGTGGTGTGCGGATCTGCTGCATAAAAACGTCGTCGCACATGACGACGCAACGGTGCGGCGCGGCATAGAGGATTGGGAGAAGTCCCCCAGGCTGTTTCCCCTTGGTAACTTCGACGGCGCTTCGATAACCATGGGTAGCTCTCCGCGTTTCCCCATGTACGACAATGACTTTGGGTGGGGCCGACCGTTAGCGATTCGGAGCGGGAAGGCCAACAAATTTGACGGTAAGATCTCTGCGTTTCCGGGGAGGGAAGGAAACGGGAGCGTTGACTTGGAAGTCGTTTTGGCGCCAGAAACGATGGCGGGGCTCGAAAACGACATGGAGTTCATGCAGTACGTAACGTGA 1386 0.5455 MTCSSTTTVSKCTVYPSQPSSLESLKLSVSDLPMLSCHYIQKGILLPPPPFSFPDLLLSLKRSLSITLSFFPPLAGRLFTDSDGYVHIQCNDAGVEFIHASAKHLATHSILYSPTLTDVPGCFKEFFAHSKTISYTGHTLPLVAVQVTELADAVFIGCTVNHAIVDGNSLWHFFNTFAEICRGAKISKFPEFTRDTVFNSSAVLKVPAGGPKVTFDDEQPLRERVFHFSREAIQKLKLTANQYGGNGVTDSTEFVEKKVNGEITTVTANGTAHKTEEISSFQSLSAQLWRSVTRARKLDPRKMSTFRMAVNCRRRLEPKMDAYYFGNAIQSIPTVAEVGEILSRDLRWCADLLHKNVVAHDDATVRRGIEDWEKSPRLFPLGNFDGASITMGSSPRFPMYDNDFGWGRPLAIRSGKANKFDGKISAFPGREGNGSVDLEVVLAPETMAGLENDMEFMQYVT 461
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral5285g00009 461 Pfam Transferase family 7 457 - -
Pral5285g00009 461 SUPERFAMILY CoA-dependent acyltransferases 60 183 - -
Pral5285g00009 461 Gene3D - 7 210 IPR023213 -
Pral5285g00009 461 Gene3D - 211 453 IPR023213 -
Pral5285g00009 461 PANTHER FAMILY REGULATORY PROTEIN, PUTATIVE (AFU_ORTHOLOGUE AFUA_3G14730)-RELATED 9 458 - -
Pral5285g00009 461 FunFam Tryptamine hydroxycinnamoyl transferase 210 455 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral5285g00009 Pral-Chr5285 338094 339918 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral5285g00009 60 451 Monolignol Biosynthesis Gene Families AT5G48930 28.894 1.43e-39 146
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral5285g00009 - - qsa:O6P43_016644 681.404