LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Pral5282g00005	ATGCCTGAAGATCTCTATTACACCAAACCTGACGACTTAGGATTCAAATTAATTGGGTCGGTGGCCGGGTTCAGCATCTCCGACAGCGTTGCTCTTCAGACAGAGTACAGGCTAAACGTCGGTGGCAGAATTATCTCAGCTACGAAAGACACGGGAATGCTCCGATATTGGGACAGCGATGACAGTTTCTCTGTTAAAAGTTATTTTTCACCCGCTGATTTTGAAGGTGAGAGAAGACCCCTGATGTTCACTAAAGTTCCTAATTACACAGCACCTGAGGAACTCTATCGAACAGAACGCGATATGGGAATGAACAAGACTTTGAACATGAACACTAACCTTACTTGGGAGTTTCCCGTCGATTCAGGCTTTACCTACATGCTGAGACTCCATTTTTGTGAGCTTAATCCAGATATCAACATTTCCTACAACAGGATATTTGATATTTACATAGCCGACCAGTTAGCTGAGCATGGTGCGAATGTCTTAAATTGGGCAAAGGGAAAAGCAGTTCCGGTATATAAAGACTATGCCGTGATCATTTCAGGTGATGCAAAACCAGCTTATCTTTCACTCAAAATGCATCCTGATTTGCAATCACCGTTGGAGTACAATGACGGGTTCTTAAATGGGCTTGAGATTTTCAAGATCAGTGATTCACAAAGTAATCTCGCCGGACCTAACCCTGATCCTCCTCCACCTCGTCCCAATCCTAATGATCTACCCCAAAAGCAAGCAAGAAAAAATAGAAGCAAGATTGTAATCGGGGTCATTTTAGGTGTTTCAGCTTCCATTGTCATTTTGATTTCCAGCATCGCATTCTTCCTCATCACTCGTGGGAAGAACATCAAGTCGAGTGATGGAACTTGTAAGTGTATTACTAATGGCTCAGCTGTGCCGACGGAACTGTGCCATCGCTTTTCCCTTGCTGAGGTCAGAGCCGCCACCAACAACTTCGATGAACTCTTCATCATCGGCGTGGGAGGATTCGGCAACGTCTACAAAGGTTACATTAAAGACGGTCAAACTCCGGTCGCAATCAAACGACTCAAACAAGGGTCGCAACAAGGGCTCCATGAGTTCCGAACAGAGATTGAGATGTTGTCCCAACTTCGTCACAATCACTTAGTATCTCTCATTGGCTACTGCAACGATGGCAACGAAATGATCCTCGTCTACGAGTTCATGGCTCGTGGGACCCTCCGTGACCATCTTTACAATTCTAACAACCACCCCCTTTCCTGGAAACAGAGGCTGAAAATTTGCCGGAGTGCAGCGCAAGGACTACATTATCTTCATGCAGGCGCGATACGAAATATCATTCATCGCGACGTGAAGACGACGAACATTTTACTTGACGAAAAATGGGTGGCTAAGTTTTCTGACTTTGGATTATCAAAAATAGGACCCACAGGAATGTCCAGGTCTCATATTACCACTGTGGTGAAAGGAAGCATTGGTTACTTGGATCCAGAATACTATAAACGCCAAAGGTTGACTCTAAAGTCTGATGTTTATTCGTTTGGCGTGGTATTACTCGAAGTATTGTGTGGGAGGCCACCTTTCTTACGGACTTTGGAGAAGGAGAAGGCAAGCTTAGTAGAATGGGTCAGAAAATGCCATCATGAGGGCGTGATTTGTGAAACTGTTGATTCGTTCATAATAGAAAGTATCAGACCAGAGAGCCTTAAAGCATTCAGCGACATGGCGTTAAAATGTTTGGAAGATGACCCAAATGAACGACCATCGATGAGTGAAGTTGAGTGGAGCCTAGAATATGCGTTGCAGCTACAAGAATGTGCAGAGGAAACTGAAGAAGAAGGAAAACGTGAGGAAGAAAGGGCACTGTTAACAGAAGTTACTGATGTGGAAGAAAGTAATAAAGTTGGTTTCAATAACTAG	1902	0.4411	MPEDLYYTKPDDLGFKLIGSVAGFSISDSVALQTEYRLNVGGRIISATKDTGMLRYWDSDDSFSVKSYFSPADFEGERRPLMFTKVPNYTAPEELYRTERDMGMNKTLNMNTNLTWEFPVDSGFTYMLRLHFCELNPDINISYNRIFDIYIADQLAEHGANVLNWAKGKAVPVYKDYAVIISGDAKPAYLSLKMHPDLQSPLEYNDGFLNGLEIFKISDSQSNLAGPNPDPPPPRPNPNDLPQKQARKNRSKIVIGVILGVSASIVILISSIAFFLITRGKNIKSSDGTCKCITNGSAVPTELCHRFSLAEVRAATNNFDELFIIGVGGFGNVYKGYIKDGQTPVAIKRLKQGSQQGLHEFRTEIEMLSQLRHNHLVSLIGYCNDGNEMILVYEFMARGTLRDHLYNSNNHPLSWKQRLKICRSAAQGLHYLHAGAIRNIIHRDVKTTNILLDEKWVAKFSDFGLSKIGPTGMSRSHITTVVKGSIGYLDPEYYKRQRLTLKSDVYSFGVVLLEVLCGRPPFLRTLEKEKASLVEWVRKCHHEGVICETVDSFIIESIRPESLKAFSDMALKCLEDDPNERPSMSEVEWSLEYALQLQECAEETEEEGKREEERALLTEVTDVEESNKVGFNN	633

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Pral5282g00005	633	MobiDBLite	consensus disorder prediction	222	246	-	-
	Pral5282g00005	633	Gene3D	Transferase(Phosphotransferase) domain 1	396	619	-	-
	Pral5282g00005	633	ProSitePatterns	Protein kinases ATP-binding region signature.	325	348	IPR017441	GO:0005524
	Pral5282g00005	633	MobiDBLite	consensus disorder prediction	226	240	-	-
	Pral5282g00005	633	Gene3D	Phosphorylase Kinase; domain 1	304	395	-	-
	Pral5282g00005	633	Coils	Coil	594	614	-	-
	Pral5282g00005	633	SMART	serkin_6	319	594	IPR000719	GO:0004672\|GO:0005524\|GO:0006468
	Pral5282g00005	633	FunFam	Receptor-like protein kinase FERONIA	396	613	-	-
	Pral5282g00005	633	FunFam	Receptor-like protein kinase FERONIA	292	395	-	-
	Pral5282g00005	633	ProSiteProfiles	Protein kinase domain profile.	319	596	IPR000719	GO:0004672\|GO:0005524\|GO:0006468
	Pral5282g00005	633	Pfam	Protein tyrosine and serine/threonine kinase	325	588	IPR001245	GO:0004672\|GO:0006468
	Pral5282g00005	633	FunFam	FERONIA receptor-like kinase	30	218	-	-
	Pral5282g00005	633	Gene3D	-	30	218	-	-
	Pral5282g00005	633	ProSitePatterns	Serine/Threonine protein kinases active-site signature.	440	452	IPR008271	GO:0004672\|GO:0006468
	Pral5282g00005	633	Pfam	Malectin-like domain	26	217	IPR024788	-
	Pral5282g00005	633	CDD	STKc_IRAK	325	587	-	-
	Pral5282g00005	633	SUPERFAMILY	Protein kinase-like (PK-like)	304	589	IPR011009	-
	Pral5282g00005	633	PANTHER	OS07G0166700 PROTEIN	304	598	IPR045272	GO:0004714\|GO:0006468

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Pral5282g00005	Pral-Chr5282	190752	192790	Dispersed/Proximal

Functional genes information

Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Pral5282g00005	1	603	Receptor kinase-like Gene Family	AT3G51550	48.490	0.0	572

Transcription factors information

Select	Regulatory Factors	Family	Gene	Hmm_acc	Hmm_name	E_value	Clan
	PK	RLK-Pelle_CrRLK1L-1	Pral5282g00005		PK_Tyr_Ser-Thr	1.1e-50	CL0016

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Pral5282g00005	-		-	pcin:129293555	653.284