Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral5282g00002 ATGCCGGGACAAGACAAAATATACCTCGAGACGAGACAGGACACAAGACAGGGTCGTCCTGTCCTAGGTCAACTAGGTTGCCCTACTCTACCTGTCAAAGGATCACGGCAACTATCAGAGATTTTGTTTAGGGGAGCACCAAGCAACGCAAAGGCATACCACCGGTCAAGTGGAGCATGTTGGAGATGGGATGAATTTGCAAGCGGTTTGCCTCAACATGTCCTTGAACAGATTGCCGGCATTCACTCGCCAACCCAAAATACAAATCCAGGTAAGTGCATATGGAGTCTTACTAGTAGCTTACGTTTCACTACTAGGTCTGCCTACAGACTCATCATGGAAGATGACTGGGATGATGAGAGCGATCGCTGGAAGCTTGTATGGAAATGGCTCAGGCCCCATAGAGTTAGAACCTTCCTATGGCTGGCTATGAGCAACAAGTTGCTAACTAATGAGATAAACAAAGTCAGTGATGAGAGAGAGAGACAAACCGCTGTGTCCAGGGTGACTAACCCGCCCACAATCGTCGTCGCCTTCCAGTTATTCTTCTTCTTCCAGCTCCTTTCCACCATCGCCTCCTACAATCCTGATGATCATTTCTCAGTCAACTGCGGTGGTTCCGACAGTTTCTCTTCTTCATATGGCCAGAACTGGACCGGAGACACAAATTCCGGTCTATTCTCTCCAATCGAACTCTTCAACAGCAATAATTCATCAGTAGGCGACAACGCAGATGGCAAATCAATCCCTTACAAGACCGCACGCTTCTCTCGCTCCGAATTCTCCTACTCGTTTCCTGTGAAGACCGGCGGCCAAAAGTTTGTTCGCCTCTACTTTTACCCGTCTTCCTACAACCTCAACTTCCTTCGCTTCGATGCTTTCTTCTCCGTCAAAGCAGGGCCCCACACCCTGCTCAAGGACTTCAACGCTTCGCTTAACGCCGACGCTGGCGCTTCACTTGAAGTTGCTGCTCCAGACGGAGCCATCGTACGCGAGTACTGTGTCAACGTTGACCCAGGACAGAGGCTGAACATAGCCTTCACACCCAACGGATCTCATCCGAACGCCTATGCTTTTGTCAATGGGATTGAGGTCGTCTCTATGCCCGATTTTCTTTATTACACAGACCCAGAAAACCTGCAGGGGATGATGCTAGATGGTGGAACCCAGCAGTATCCAGTTCAGAACAGCAGTGCTCTCGAGACTGTGTACCGAGCTAACGTTGGCGGAGGTCCGATAGGTTCCAGTTCAGACACAGGCATGTTTCGTTATTGGGAGCAGGACAATCCCTACTTGGAGAGGGAGCGCCCACAGAGTGTATCCGCAGGTTTTGGTTTAGATGTGGATCACACAAATTATCCAAATTATACTGCACCGGACGTAGTATACAAGACTGCTCGAAACTATGGGAGGCAAGAGAAGTCCAAATTTAACGTGACCTGGCGTTTTCAAGTGGATTCAGTCTTTCATTACATGGTAAGATTGCATTTTTGTGAGTTTGATGAAAATATTGAAAAAGTGGGAGACAGAGTTTTTCAGATCTTCATAAATGATGCTTTGGTGGAGCCTCTTGCCGATGTGATGATATGGGCTCACAAAAGATTGGTTCCTATCCATAAGGACTATGCGGTGTCGATGCCGAGTGATGGAAGGTCAAAGAAGCTGAATCTTTCAATTCAGTTGCAACCACACCCAACCGCAAGAAGCACTTACAGGGATGTTTTATTGAACGGTATTGAAATTTTTAAAATAAGTGACTACAATGATAATCTTGCGGGTCCTAATCCTGATCCAATTCAATCTCCATCCACGCCGTCCTACAACTCATCGAGGAACAGAAACAAAGGAAGGGTAATTTTCATTATCGTTGTTGCAACATCAGGCTTCCTTGTGCTGTCTCTTATTGTTCTGTTCATTTTCCGGCGATTCATTAGAGCTCCGGTCAAGGAAGGATCTTCATGGTGGGGACAAAAATCAGTTGACTCGTCCAAAAAAGACAAACCCCGTGGGTCATCATCATTACCGTCGGATTTGTGTCGCTACTTTTCTATAGATGAAATAAGAGCAGCCACAAGTAACTTCAATGATATTTTCATTGTGGGGGTTGGAGGGTTTGGTAATGTTTATAAAGGCTATATTGATGATGGAACAGTCCCTGTGGCTATCAAACGGCTCAAACCAGGTTCCCAACAAGGCCTCCGTGAGTTCCAAACTGAGATTGAAATGCTCTCTCAGCTTCGTCACAATCATTTAGTTCCTCTCATTGGTTACTGCAACGATGGCAACGAGATGATCCTCGTTTACGAGTTCATGGCTCGTGGGACCCTCCGTGACCATATTTATGATTCCGATAACCCTCCACTTTCCTGGAAACAAAGGCTGGCGATGTGCATTGGTGCTGCTCGTGGACTCCACTATCTTCACACTGGTGCGAACCGCAATATAATCCACCGTGATGTGAAGTCCACAAATATCTTAATAGATGAGAAATGGGTGGCTAAGGTTTCGGATTTTGGACTATCCAAGATAGGACCCACGGGATTGTCCAAGTCTCACATAAGCACGGTGGTAAAAGGAAGCATGGGTTACTTGGACCCAGAATACTATAAACGTCAAAGGTTGACTGAAAAGTCTGACGTTTACTCTTTCGGAGTTGTATTGCTGGAAGTATTGTGTGGGAGACCTCCTTTGATACGTAACGTGGAGAAGCAGAAACTAAGTTTAGTGGAGTGGGTTCGAAAATGTCATCACGAGGGTGTGATTCATCAAACGGTTGACCCGTTCCTGGTAGAAAGTATCACACCAGAGTGCTTAAAAGCGTTCAGCGACATGGCCCTGAAATGTCTGGGGGAAGATGGAAATGAACGACCTTCGATGAACGACGTCGTGTGGGGCTTAGAGTTTGCGTTGCAGCTTCAAGAAGGCACAGAGGAAGCGGGGCTTCTTGTTGATGAGGGCGAAATTGAAGGAAAGAGCGAGGAAAGGGCTCTGATAAGGAAAACGACAAATGTGGAAGAAAGAGAAAGCAAAGTGGGGTTCACGAGCAGTGATGAATCAAAAGGAAGCAGGTTGACTAGTTCAAGCAGTGAAGATCAATCTCTAGTTTCTGGATTGATCTTCTCTGAGCTGGGTCATCCGTCGGTTCGATGA 3150 0.4663 MPGQDKIYLETRQDTRQGRPVLGQLGCPTLPVKGSRQLSEILFRGAPSNAKAYHRSSGACWRWDEFASGLPQHVLEQIAGIHSPTQNTNPGKCIWSLTSSLRFTTRSAYRLIMEDDWDDESDRWKLVWKWLRPHRVRTFLWLAMSNKLLTNEINKVSDERERQTAVSRVTNPPTIVVAFQLFFFFQLLSTIASYNPDDHFSVNCGGSDSFSSSYGQNWTGDTNSGLFSPIELFNSNNSSVGDNADGKSIPYKTARFSRSEFSYSFPVKTGGQKFVRLYFYPSSYNLNFLRFDAFFSVKAGPHTLLKDFNASLNADAGASLEVAAPDGAIVREYCVNVDPGQRLNIAFTPNGSHPNAYAFVNGIEVVSMPDFLYYTDPENLQGMMLDGGTQQYPVQNSSALETVYRANVGGGPIGSSSDTGMFRYWEQDNPYLERERPQSVSAGFGLDVDHTNYPNYTAPDVVYKTARNYGRQEKSKFNVTWRFQVDSVFHYMVRLHFCEFDENIEKVGDRVFQIFINDALVEPLADVMIWAHKRLVPIHKDYAVSMPSDGRSKKLNLSIQLQPHPTARSTYRDVLLNGIEIFKISDYNDNLAGPNPDPIQSPSTPSYNSSRNRNKGRVIFIIVVATSGFLVLSLIVLFIFRRFIRAPVKEGSSWWGQKSVDSSKKDKPRGSSSLPSDLCRYFSIDEIRAATSNFNDIFIVGVGGFGNVYKGYIDDGTVPVAIKRLKPGSQQGLREFQTEIEMLSQLRHNHLVPLIGYCNDGNEMILVYEFMARGTLRDHIYDSDNPPLSWKQRLAMCIGAARGLHYLHTGANRNIIHRDVKSTNILIDEKWVAKVSDFGLSKIGPTGLSKSHISTVVKGSMGYLDPEYYKRQRLTEKSDVYSFGVVLLEVLCGRPPLIRNVEKQKLSLVEWVRKCHHEGVIHQTVDPFLVESITPECLKAFSDMALKCLGEDGNERPSMNDVVWGLEFALQLQEGTEEAGLLVDEGEIEGKSEERALIRKTTNVEERESKVGFTSSDESKGSRLTSSSSEDQSLVSGLIFSELGHPSVR 1049
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral5282g00002 1049 ProSitePatterns Protein kinases ATP-binding region signature. 700 723 IPR017441 GO:0005524
Pral5282g00002 1049 MobiDBLite consensus disorder prediction 1015 1035 - -
Pral5282g00002 1049 CDD STKc_IRAK 700 963 - -
Pral5282g00002 1049 Pfam zinc-binding in reverse transcriptase 103 152 IPR026960 -
Pral5282g00002 1049 MobiDBLite consensus disorder prediction 654 674 - -
Pral5282g00002 1049 FunFam Receptor-like protein kinase FERONIA 771 987 - -
Pral5282g00002 1049 Gene3D - 199 368 - -
Pral5282g00002 1049 Gene3D - 398 585 - -
Pral5282g00002 1049 MobiDBLite consensus disorder prediction 993 1035 - -
Pral5282g00002 1049 Gene3D Phosphorylase Kinase; domain 1 656 770 - -
Pral5282g00002 1049 SMART serkin_6 694 969 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pral5282g00002 1049 FunFam FERONIA receptor-like kinase 398 585 - -
Pral5282g00002 1049 ProSitePatterns Serine/Threonine protein kinases active-site signature. 815 827 IPR008271 GO:0004672|GO:0006468
Pral5282g00002 1049 MobiDBLite consensus disorder prediction 993 1014 - -
Pral5282g00002 1049 Pfam Malectin-like domain 202 584 IPR024788 -
Pral5282g00002 1049 SUPERFAMILY Protein kinase-like (PK-like) 670 968 IPR011009 -
Pral5282g00002 1049 FunFam Receptor-like protein kinase FERONIA 666 770 - -
Pral5282g00002 1049 FunFam FERONIA receptor-like kinase 199 369 - -
Pral5282g00002 1049 ProSiteProfiles Protein kinase domain profile. 694 969 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pral5282g00002 1049 Gene3D Transferase(Phosphotransferase) domain 1 771 982 - -
Pral5282g00002 1049 PANTHER OS03G0124300 PROTEIN-RELATED 177 653 IPR046957 GO:0004672
Pral5282g00002 1049 Pfam Protein tyrosine and serine/threonine kinase 700 963 IPR001245 GO:0004672|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral5282g00002 Pral-Chr5282 143778 161771 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral5282g00002 188 1049 Receptor kinase-like Gene Family AT3G51550 46.527 0.0 747
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_CrRLK1L-1 Pral5282g00002 Malectin_like 1.7e-40 CL0202
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral5282g00002 - - pcin:129293555 1267.29