Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral5282g00001 ATGCGGGTGCCACATGATTATATGTCTGATACTTTTTATGAGAATTTAAAATTAAATTATAATATCTTAAAAACAAAATACACAATTTATACACGTATCTCTCGCTCTGAAATCTCCTACTTGTTTCCATTGAAGACCGGCGGCCAAAAGTTTATTCGCCTTTACTTTTACCCATTTTCCTACGAACCCAACTTCCTTCGGTCCGACACGTTCTTCTCCGTCAGAGTTGGATCTCACACTCTTTTGAAAGACTTTAATGCTTCAATCACCGCTGATGACGCTGGCGAAGAAACCATTGTACGAGAGTACTGCCTCAATATATATGGACCCAGTGAGGGGCTTATGATAACCTTCACGCCCAACCCATCTCATCAAAACGCTTATGCTTTCGTCAATGGTATTGAGGCTGTCTCTATGCTCGCCTTTCTTTATTACACAGACCCAAAAAATCTGCAAGGGATGATGCTAGATGGTGGAAACCTGCAGTATCCAGTTCAGAGCAGCACTGCTCTGGAGACTATTTACAGAGCTAATGTTGGCGGAAGTCAGATCGGTTCCGATGAAGACACAGGCATGTTTCGTTATTGGGAGCAGGATAATGCATACTTGGAGCGGGAGCGCCCATTTAGTGTATCCGCAGGTTTTCGTTTGCAGATAGATCACACAAATTATCCAAATTATACTGCACCAGGTAAAGTATACCTGACTGCTCGAAACGATGGGGTGAAGGAAAAGTCCAGATTTAACGTGACCTGGCAGTTTCCAGTGGACTCAGCGTTTCATTATATGGTGAGATTGCATTTTTGTGAGTTTGATGAAAAAATTCGCAACACTGGGGACAGAGTTTTTCAAATCTTCATAAATGATGCTTTGGTAGAGCATCTCGCCGATGTGATGATGTGGACTCAGAAATTATTAGTTCCTATCCACAAGGACTACGCGGTGTGGATGCCGGGTGACGGAAGGTTAAAGAAGCTGAATCTTTCAATTAAGTTGCAACCACACCCAACTGGGAGAAGCACTTATAGAGATGTCTTATTGAATGGCATCGAAATTCTTAAAGTAAGTGACTTTAGAAACAGCGTCGCAAGTTCCAATCCCGATCCACCTCTTTCTCCCCCATTGCTTCCGAAGGCTCCTAACAAGAACCCACCAAAAATGAGACTCACTTCTATAATTGTGGGGTCAACTTTCGGCTTCATTGTGCTATCTCTCATCATTTTGCTGGCTTACTGTCCATTGGCTAGAGCTGTAACCAATCAAGGAAATCCACAGTTGGGACCAAAATCATTGTTGACGTCAAAAACAATCAAATCCTCAGTGTTGCCATATGATTTATGTCGTTACTTCTCAATAATCGTGGTAAGAGCAGCCACTAATAATTTCCATGATAGTTTAATTATAGGCGTTGGAGGGTTTGGTAATGTCTATAAAGGTCACATTGAGAACGGTTCAGTTCCTGTGGCAATCAAGCGTCTCAAACAAGGTTCACAACAGGGGCTTAAAGAGTTCGAAACTGAGATTGAAATGCTTTCTCAACTTCGTCACCATCATTTGGTATCTCTCATTGGTTACTGCAATGATGACAATGAGATGATCCTCATCTATGAGTTCATGGCTCGTGGGACCTTTCGTGAGCATCTTTATGATTCTGAAAACAAACCACTTTCTTGGAATCAAAGGCTGGAGATTTGCCTAGGTGCTGGACGAGGGCTTCATTATCTACATACAGGTGCAAAGCAAGCAATTATTCATCGTGACATCAAGTCGAAAAACATCTTAGTAGATGAGAATTGGATGGCCAAGATTTCGGACTCTGAACTGTCCAAACTGGGACCTGGGGGTATTTCTAGATCTAACATTAACATAAGCACATTAGTGAAAGGAAGCATTGGTTATATGGATCAAGAATACTACACATTGCAAATCTCGACGGATAAGTCAGACGTATTCTCATTTGGAGTTGTGTTGCTAAAGGCATTATGTGGAAGGCCTCCTATTCTCCGTGCAGTGGACAGGGAGTGGCAAAACCTTGTAGACTGGTTTCAAAGATTTGTTGATCAGAATGCCATTTATGAGAATGTGGATTCATTCATCAGAGAAAGTATAACGCCGAAGTGCTTAAAAGCATACACTGAGATTGCATTGAAATGTGTAGCTAAAAATGGGAATGAACAGCCATCCATGGGTGATGTGATGCTAGGCCTAGAATGTTTAATGGAGACAATGGACAAAGCAGAGAAGACAAAGCCTGGTGGGACTCTAAATGGGGACATTATTGTTGAAGAAGGATCAGCATTCAATGGGTGA 2310 0.419 MRVPHDYMSDTFYENLKLNYNILKTKYTIYTRISRSEISYLFPLKTGGQKFIRLYFYPFSYEPNFLRSDTFFSVRVGSHTLLKDFNASITADDAGEETIVREYCLNIYGPSEGLMITFTPNPSHQNAYAFVNGIEAVSMLAFLYYTDPKNLQGMMLDGGNLQYPVQSSTALETIYRANVGGSQIGSDEDTGMFRYWEQDNAYLERERPFSVSAGFRLQIDHTNYPNYTAPGKVYLTARNDGVKEKSRFNVTWQFPVDSAFHYMVRLHFCEFDEKIRNTGDRVFQIFINDALVEHLADVMMWTQKLLVPIHKDYAVWMPGDGRLKKLNLSIKLQPHPTGRSTYRDVLLNGIEILKVSDFRNSVASSNPDPPLSPPLLPKAPNKNPPKMRLTSIIVGSTFGFIVLSLIILLAYCPLARAVTNQGNPQLGPKSLLTSKTIKSSVLPYDLCRYFSIIVVRAATNNFHDSLIIGVGGFGNVYKGHIENGSVPVAIKRLKQGSQQGLKEFETEIEMLSQLRHHHLVSLIGYCNDDNEMILIYEFMARGTFREHLYDSENKPLSWNQRLEICLGAGRGLHYLHTGAKQAIIHRDIKSKNILVDENWMAKISDSELSKLGPGGISRSNINISTLVKGSIGYMDQEYYTLQISTDKSDVFSFGVVLLKALCGRPPILRAVDREWQNLVDWFQRFVDQNAIYENVDSFIRESITPKCLKAYTEIALKCVAKNGNEQPSMGDVMLGLECLMETMDKAEKTKPGGTLNGDIIVEEGSAFNG 769
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral5282g00001 769 ProSitePatterns Protein kinases ATP-binding region signature. 468 491 IPR017441 GO:0005524
Pral5282g00001 769 CDD STKc_IRAK 468 732 - -
Pral5282g00001 769 FunFam Receptor-like protein kinase FERONIA 434 538 - -
Pral5282g00001 769 SUPERFAMILY Protein kinase-like (PK-like) 438 742 IPR011009 -
Pral5282g00001 769 PANTHER OS03G0124300 PROTEIN-RELATED 25 411 IPR046957 GO:0004672
Pral5282g00001 769 Pfam Malectin-like domain 31 355 IPR024788 -
Pral5282g00001 769 Gene3D Transferase(Phosphotransferase) domain 1 539 755 - -
Pral5282g00001 769 FunFam FERONIA receptor-like kinase 169 356 - -
Pral5282g00001 769 SMART serkin_6 462 739 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pral5282g00001 769 Gene3D - 169 356 - -
Pral5282g00001 769 Gene3D - 23 139 - -
Pral5282g00001 769 FunFam FERONIA receptor-like kinase 9 140 - -
Pral5282g00001 769 Pfam Protein tyrosine and serine/threonine kinase 468 733 IPR001245 GO:0004672|GO:0006468
Pral5282g00001 769 ProSitePatterns Serine/Threonine protein kinases active-site signature. 583 595 IPR008271 GO:0004672|GO:0006468
Pral5282g00001 769 ProSiteProfiles Protein kinase domain profile. 462 743 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pral5282g00001 769 Gene3D Phosphorylase Kinase; domain 1 447 538 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral5282g00001 Pral-Chr5282 26520 33903 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral5282g00001 32 763 Receptor kinase-like Gene Family AT3G51550 43.268 0.0 579
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_CrRLK1L-1 Pral5282g00001 Malectin_like 2.2e-31 CL0202
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral5282g00001 - - pcin:129293555 856.67