Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral5280g00098 ATGTCGTCGCTGACGAACATAGCTCCTCAGAAAGCAATCATAGCAGAAACAGGAGAAGCAGTCGACGCCGATGAGGTGAAAGTGAACGCCATCATAGCCGTTAAAGCAGGAGAAGTGATACCCATTGATGGGATTGTTGTAGAAGGCAGCTGCGAAGTTGATGAGAAGACATTGACTGGGGAATCATTCCCTGTGCTTAAACAGAAGGACTCTCTCGTGTGGGCTGGTACAATCAACTTAAATGGTTACATTGATGTGAAGACTACTGCACTTTCCGAGGACTGTGTGGTGGCCAAAATGGCGAAGCTTGTGGAAGAAGCCCAAAACAGCAAAACCAGCACCCAGAGATCGATTGATAAATTTGCCAAAATTTACACCCCAGCTGTTGTGGTCATATCAACTCTCTTAGCGGTGATTCCACTTGTGTTAAGGGTAAATAATCAGAAACATTGGTTTCACTTTGCCTTGGTTGTTTTAGTAAGTGCATGTCCTTGTGCACTTGTCCTTTCTACGCCAGTTGCAACTTTCTGTGCTTATACCAAAGCAGCTAAATCCGGTCTTCTCATCAAAGGGGGCGATTACCTTGAAACCCTTGCAAAAATTAAGGTGATGGCTTTTGACAAAACGGGTACTATCACAAAGGGGGAATTTTTGGTGTCAAATTTCCAGTCTCTTTGTGATGACATCGATATGAAAACATTACTACAATGGGTCACAAGCATCGAAAGCAAGTCAAGCCATCCGATTGCAGCAGCACTTGTGGACTACGGAAGGTCTCTATCCATTGAGCCAAAGCCCGAAAAGGTGACAGAATTTGAAAATTTTCCTGGAGAGGGCATTCATGGAAAAATTGATGGGAGAGATATTTACATTGGAAATAGAAAAGTTGTCACTAGAGCTGGGTCTGAAACAGTTCCTGCCTCACAAGGTGACATTCCGGTTGGAAAAACAACTGGCTACATCTACTCTGGAGCAAAGCCAATTGGACTTTTCTCACTGACAGATGCTTGCCGATCTGGCGCCCAGGAGGCATTGGGGCAGCTGAAGTCATTGAGCATCAAAACCTCAATGCTCACAGGAGATAGTCAAGCAGCTGCCATGCAAGCACATGACCAGCTAGGGCATGTTCTGGAGCTAGTCCATGCAGAACTTTTACCTGAAGACAAGGCAAAAATCATCAAAGAATTCAACAAGGAAGGACGAACAGCCATGGTTGGAGATGGCATAAATGATGCACCCGCACTGGCTGTAGCTGATATTGGTATCTCAATGGGGATTTCAGGTTCTGCACTAGCAAGTGAGACGGGCAATATAATTCTTATGTCAAATGATCTGAGGAAGATACCTCAAGCCATTAAGCTTGCAAGAAAATCTCACAGGAAAGTAATAGAAAATATTCTCTTGTCAGTCGTTACTAAAGCTGTCATTCTTGGCTTGGCCATATGGGGCCATCCACTGGTTTGGGCAGCAGTTCTTGCTGACGTGGGAACATGCGTGTTGGTAATCTTAAACAGCATGCTAATTTTGAATGGGTCATCCAAGCATAAAGGAAAATGTTGTAGACCTTCCTCTGGACTACACAGCCATAAATATGGATGCAAGGCACCTAATGACAAGTTCTCTCATCATCATCATCATCATCATGAACATAAACACCAGCATCAGAACGATCACCATTGTTTCTCAGACAAGAAGGAAGTGATGTCTCAGCCTCATAAATGCGCCTCCCTAATTACTGTCTCAAAGTGCCAGTCTAGCCCTGCATTTTCAGGCTCGTGTGGACATGCTATGCATGGTAACATCACGGAGAGTCATGCTCAATGTAAAGTCAATGCTGAGTTCAATGTACCCAATCATTGCCATCAAGGAAGCTGTGACCAGAAGCAAGAGGGAGTTCATTTGCATGATGTGAAAAATGCAAGTTGTCTGGGTTCTCACAAATTGGATCTGCTTGCAGAAGAGAAACACGAGATTACATTCAACAGCATTGGTAATTGTTTGGAACATACTAAGTCCCATGAAACAGTACACTGCCATAATGGAAACTGTGACATGGGAACTCATGGTGAACCATCACCCATTTCTCCTTGCCATCTCAATTCTTCTGCTTTGAAAGATTGCCTGCAATTTGGTAGCAAACATTGCCACTTGATCTCTGGTTGTGAAAATACAAAATGTCATGCCATTGAGCGCCAAAACCCAGGGTCTCATTCTGAACCTTCCAAGAAGCACCAGGAAGATCATGTCCGTCTTAACATTGACGATGAGCATGTCAAGTCAGACTCAATGGGAACTTGTGTATATTCAGAAGGGAAAGAAACAGGGTCCTGTCACAAAGGCTGCGCGGAAGAATGTGAAGCATCCACTTCCGTGTGCAATTGTGAGAGTTCAAATGACAGACAAGTTGCTGCATGTTGCATAGACGAGATCTCTTCAAAGGAATCCACAGATTTTGCTGTTTTGCAGGCTTGTTTAAGTTTAGACAAGAGAGAGAATGGTTCGTGTTGCAAGAGCCACATGAAGGAATGCTGTGGCAAGCATGAACATTTACATGCTGGTTTTGTAGGAGGCTTATCAGATATTATCATTGAATAG 2595 0.4382 MSSLTNIAPQKAIIAETGEAVDADEVKVNAIIAVKAGEVIPIDGIVVEGSCEVDEKTLTGESFPVLKQKDSLVWAGTINLNGYIDVKTTALSEDCVVAKMAKLVEEAQNSKTSTQRSIDKFAKIYTPAVVVISTLLAVIPLVLRVNNQKHWFHFALVVLVSACPCALVLSTPVATFCAYTKAAKSGLLIKGGDYLETLAKIKVMAFDKTGTITKGEFLVSNFQSLCDDIDMKTLLQWVTSIESKSSHPIAAALVDYGRSLSIEPKPEKVTEFENFPGEGIHGKIDGRDIYIGNRKVVTRAGSETVPASQGDIPVGKTTGYIYSGAKPIGLFSLTDACRSGAQEALGQLKSLSIKTSMLTGDSQAAAMQAHDQLGHVLELVHAELLPEDKAKIIKEFNKEGRTAMVGDGINDAPALAVADIGISMGISGSALASETGNIILMSNDLRKIPQAIKLARKSHRKVIENILLSVVTKAVILGLAIWGHPLVWAAVLADVGTCVLVILNSMLILNGSSKHKGKCCRPSSGLHSHKYGCKAPNDKFSHHHHHHHEHKHQHQNDHHCFSDKKEVMSQPHKCASLITVSKCQSSPAFSGSCGHAMHGNITESHAQCKVNAEFNVPNHCHQGSCDQKQEGVHLHDVKNASCLGSHKLDLLAEEKHEITFNSIGNCLEHTKSHETVHCHNGNCDMGTHGEPSPISPCHLNSSALKDCLQFGSKHCHLISGCENTKCHAIERQNPGSHSEPSKKHQEDHVRLNIDDEHVKSDSMGTCVYSEGKETGSCHKGCAEECEASTSVCNCESSNDRQVAACCIDEISSKESTDFAVLQACLSLDKRENGSCCKSHMKECCGKHEHLHAGFVGGLSDIIIE 864
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral5280g00098 864 Gene3D - 196 456 IPR023214 -
Pral5280g00098 864 ProSitePatterns E1-E2 ATPases phosphorylation site. 207 213 IPR018303 -
Pral5280g00098 864 SUPERFAMILY HAD-like 204 506 IPR036412 -
Pral5280g00098 864 PRINTS H+-transporting ATPase (proton pump) signature 378 394 IPR001757 GO:0005215|GO:0005524|GO:0016020|GO:0016887
Pral5280g00098 864 PRINTS H+-transporting ATPase (proton pump) signature 405 421 IPR001757 GO:0005215|GO:0005524|GO:0016020|GO:0016887
Pral5280g00098 864 PRINTS H+-transporting ATPase (proton pump) signature 437 462 IPR001757 GO:0005215|GO:0005524|GO:0016020|GO:0016887
Pral5280g00098 864 PRINTS P-type cation-transporting ATPase superfamily signature 54 68 - -
Pral5280g00098 864 PRINTS P-type cation-transporting ATPase superfamily signature 205 219 - -
Pral5280g00098 864 PRINTS P-type cation-transporting ATPase superfamily signature 329 340 - -
Pral5280g00098 864 PRINTS P-type cation-transporting ATPase superfamily signature 429 441 - -
Pral5280g00098 864 PRINTS P-type cation-transporting ATPase superfamily signature 351 361 - -
Pral5280g00098 864 PRINTS P-type cation-transporting ATPase superfamily signature 405 424 - -
Pral5280g00098 864 SFLD C1.7: P-type atpase like 188 457 - -
Pral5280g00098 864 Gene3D - 216 337 IPR023299 GO:0000166
Pral5280g00098 864 SUPERFAMILY Calcium ATPase, transduction domain A 19 104 IPR008250 -
Pral5280g00098 864 CDD P-type_ATPase_HM 1 507 - -
Pral5280g00098 864 Pfam haloacid dehalogenase-like hydrolase 201 419 - -
Pral5280g00098 864 SUPERFAMILY Calcium ATPase, transmembrane domain M 105 298 IPR023298 -
Pral5280g00098 864 NCBIfam heavy metal translocating P-type ATPase 2 507 IPR027256 GO:0006812|GO:0016020|GO:0019829
Pral5280g00098 864 ProSitePatterns Hypothetical cof family signature 2. 405 427 - -
Pral5280g00098 864 Gene3D - 1 108 - -
Pral5280g00098 864 PANTHER CADMIUM/ZINC-TRANSPORTING ATPASE HMA2-RELATED 1 510 - -
Pral5280g00098 864 NCBIfam HAD-IC family P-type ATPase 7 483 IPR001757 GO:0005215|GO:0005524|GO:0016020|GO:0016887
Pral5280g00098 864 Pfam E1-E2 ATPase 15 184 - -
Pral5280g00098 864 MobiDBLite consensus disorder prediction 537 556 - -
Pral5280g00098 864 FunFam Putative cadmium/zinc-transporting ATPase 3 216 337 - -
Pral5280g00098 864 MobiDBLite consensus disorder prediction 539 554 - -
Pral5280g00098 864 FunFam Copper-transporting ATPase 1, putative 1 108 - -
Pral5280g00098 864 SFLD p-type atpase 188 457 IPR044492 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral5280g00098 Pral-Chr5280 948396 954313 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral5280g00098 1 848 Primary Pumps ATPases AT2G19110 50.000 0.0 756
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral5280g00098 K01534 - gmx:100817567 1022.31