Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral5280g00097 ATGGCTGCCGAGGGAAAGGAAAAGGTAGTGAAGAAGTTGCAAAAAAGCTACTTCGATGTGCTAGGACTTTGCTGCTCATCGGAGGTGCCTCTGATCGAGAACATCCTGAAAGCTCTCGACGGAATCAAAGAGGTTTCCGTCATCGTGCCTTCCAGAACGGTCATTGTTGTTCATGATAGTCTTGTAATCTCACAGGCTCAAATCGTTAAGGCGCTGAATCAAGCAAGATTTGAAGCAAATATCAGATCCGAGAATGGGACAGAGACGCTGCAAAAGAGAATGCCAAGCCCATATGCAATTGCTTGTGGAGTTTTCCTTTTGTTATCCTTTTTAAAGTATGCTTACCGTCCTTTGGAATATCTGGCCCTTGGAGCAGTAGCTGCTGGTGCCTTCCCTATTCTTTTGAAAGCCCTCGCCTCCATTCGCAACCTTAGGATTGACATAAATATTCTCATGCTCATTGCAGTTATTGGGACAATTGCTATGAATGATTATTTGGAAGCCGGCACCATAGTTTTTTTATCTTCAATTGCAGAATGGCTAGAGTCAAGGGCAAGCCACAGGGCGAGCGCAGCGATGTCGTCGCTGACGAACATAGCTCCTCAGAAAGCAATCATAGCAGAAACAGGAGAAGCAGTCGACGCCGATGAGGTGAAAGTGAACGCCATCATAGCCGTTAAAGCAGGAGAAGTGATACCCATTGATGGGATTGTTGTAGAAGGCAGCTGCGAAGTTGATGAGAAGACATTGACTGGGGAATCATTCCCTGTGCTTAAACAGAAGGACTCTCTCGTGTGGGCTGGTACAATCAACTTAAATGGTTACATTGATGTGAAGACTACTGCACTTTCCGAGGACTGTGTGGTGGCCAAAATGGCGAAGCTTGTGGAAGAAGCCCAAAACAGCAAAACCAGCACCCAGAGATCGATTGATAAATTTGCCAAAATTTACACCCCAGCTGTTGTGGTCATATCAACTCTCTTAGCGGTGATTCCACTTGTGTTAAGGGTAAATAATCAGAAACATTGGTTTCACTTTGCCTTGGTTGTTTTAGTAAGTGCATGTCCTTGTGCACTTGTCCTTTCTACGCCAGTTGCAACTTTCTGTGCTTATACCAAAGCAGCTAAATCCGGTCTTCTCATCAAAGGGGGCGATTACCTTGAAACCCTTGCAAAAATTAAGGTGATGGCTTTTGACAAAACGGGTACTATCACAAAGGGGGAATTTTTGGTGTCAAATTTCCAGTCTCTTTGTGATGACATCGATATGAAAACATTACTACAATGGGTCACAAGCATCGAAAGCAAGTCAAGCCATCCGATTGCAGCAGCACTTGTGGACTACGGAAGGTCTCTATCCATTGAGCCAAAGCCCGAAAAGGTGACAGAATTTGAAAATTTTCCTGGAGAGGGCATTCATGGAAAAATTGATGGGAGAGATATTTACATTGGAAATAGAAAAGTTGTCACTAGAGCTGGGTCTGAAACAGTTCCTGCCTCACAAGGTGACATTCCGGTTGGAAAAACAACTGGCTACATCTACTCTGGAGCAAAGCCAATTGGACTTTTCTCACTGACAGATGCTTGCCGATCTGGCGCCCAGGAGGCATTGGGGCAGCTGAAGTCATTGAGCATCAAAACCTCAATGCTCACAGGAGATAGTCAAGCAGCTGCCATGCAAGCACATGACCAGCTAGGGCATGTTCTGGAGCTAGTCCATGCAGAACTTTTACCTGAAGACAAGGCAAAAATCATCAAAGAATTCAACAAGGAAGGACGAACAGCCATGGTTGGAGATGGCATAAATGATGCACCCGCACTGGCTGTAGCTGATATTGGTATCTCAATGGGGATTTCAGGTTCTGCACTAGCAAGTGAGACGGGCAATATAATTCTTATGTCAAATGATCTGAGGAAGATACCTCAAGCCATTAAGCTTGCAAGAAAATCTCACAGGAAAGTAATAGAAAATATTCTCTTGTCAGTCGTTACTAAAGCTGTCATTCTTGGCTTGGCCATATGGGGCCATCCACTGGTTTGGGCAGCAGTTCTTGCTGACGTGGGAACATGCGTGTTGGTAATCTTAAACAGCATGCTAATTTTGAATGGGTCATCCAAGCATAAAGGAAAATGTTGTAGACCTTCCTCTGGACTACACAGCCATAAATATGGATGCAAGGCACCTAATGACAAGTTCTCTCATCATCATCATCATCATCATGAACATAAACACCAGCATCAGAACGATCACCATTGTTTCTCAGACAAGAAGGAAGTGATGTCTCAGCCTCATAAATGCGCCTCCCTAATTACTGTCTCAAAGTGCCAGTCTAGCCCTGCATTTTCAGGCTCGTGTGGACATGCTATGCATGGTAACATCACGGAGAGTCATGCTCAATGTAAAGTCAATGCTGAGTTCAATGTACCCAATCATTGCCATCAAGGAAGCTGTGACCAGAAGCAAGAGGGAGTTCATTTGCATGATGTGAAAAATGCAAGTTGTCTGGGTTCTCACAAATTGGATCTGCTTGCAGAAGAGAAACACGAGATTACATTCAACAGCATTGGTAATTGTTTGGAACATACTAAGTCCCATGAAACAGTACACTGCCATAATGGAAACTGTGACATGGGAACTCATGGTGAACCATCACCCATTTCTCCTTGCCATCTCAATTCTTCTGCTTTGAAAGATTGCCTGCAATTTGGTAGCAAACATTGCCACTTGATCTCTGGTTGTGAAAATACAAAATGTCATGCCATTGAGCGCCAAAACCCAGGGTCTCATTCTGAACCTTCCAAGAAGCACCAGGAAGATCATGTCCGTCTTAACATTGACGATGAGCATGTCAAGTCAGACTCAATGGGAACTTGTGTATATTCAGAAGGGAAAGAAACAGGGTCCTGTCACAAAGGCTGCGCGGAAGAATGTGAAGCATCCACTTCCGTGTGCAATTGTGAGAGTTCAAATGACAGACAAGTTGCTGCATGTTGCATAGACGAGATCTCTTCAAAGGAATCCACAGATTTTGCTGTTTTGCAGGCTTGTTTAAGTTTAGACAAGAGAGAGAATGGTTCGTGTTGCAAGAGCCACATGAAGGAATGCTGTGGCAAGCATGAACATTTACATGCTGGTTTTGTAGGAGGCTTATCAGATATTATCATTGAATAG 3171 0.4409 MAAEGKEKVVKKLQKSYFDVLGLCCSSEVPLIENILKALDGIKEVSVIVPSRTVIVVHDSLVISQAQIVKALNQARFEANIRSENGTETLQKRMPSPYAIACGVFLLLSFLKYAYRPLEYLALGAVAAGAFPILLKALASIRNLRIDINILMLIAVIGTIAMNDYLEAGTIVFLSSIAEWLESRASHRASAAMSSLTNIAPQKAIIAETGEAVDADEVKVNAIIAVKAGEVIPIDGIVVEGSCEVDEKTLTGESFPVLKQKDSLVWAGTINLNGYIDVKTTALSEDCVVAKMAKLVEEAQNSKTSTQRSIDKFAKIYTPAVVVISTLLAVIPLVLRVNNQKHWFHFALVVLVSACPCALVLSTPVATFCAYTKAAKSGLLIKGGDYLETLAKIKVMAFDKTGTITKGEFLVSNFQSLCDDIDMKTLLQWVTSIESKSSHPIAAALVDYGRSLSIEPKPEKVTEFENFPGEGIHGKIDGRDIYIGNRKVVTRAGSETVPASQGDIPVGKTTGYIYSGAKPIGLFSLTDACRSGAQEALGQLKSLSIKTSMLTGDSQAAAMQAHDQLGHVLELVHAELLPEDKAKIIKEFNKEGRTAMVGDGINDAPALAVADIGISMGISGSALASETGNIILMSNDLRKIPQAIKLARKSHRKVIENILLSVVTKAVILGLAIWGHPLVWAAVLADVGTCVLVILNSMLILNGSSKHKGKCCRPSSGLHSHKYGCKAPNDKFSHHHHHHHEHKHQHQNDHHCFSDKKEVMSQPHKCASLITVSKCQSSPAFSGSCGHAMHGNITESHAQCKVNAEFNVPNHCHQGSCDQKQEGVHLHDVKNASCLGSHKLDLLAEEKHEITFNSIGNCLEHTKSHETVHCHNGNCDMGTHGEPSPISPCHLNSSALKDCLQFGSKHCHLISGCENTKCHAIERQNPGSHSEPSKKHQEDHVRLNIDDEHVKSDSMGTCVYSEGKETGSCHKGCAEECEASTSVCNCESSNDRQVAACCIDEISSKESTDFAVLQACLSLDKRENGSCCKSHMKECCGKHEHLHAGFVGGLSDIIIE 1056
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral5280g00097 1056 Gene3D - 9 83 - -
Pral5280g00097 1056 Pfam haloacid dehalogenase-like hydrolase 393 611 - -
Pral5280g00097 1056 SFLD C1.7: P-type atpase like 380 649 - -
Pral5280g00097 1056 ProSitePatterns E1-E2 ATPases phosphorylation site. 399 405 IPR018303 -
Pral5280g00097 1056 FunFam Copper-transporting ATPase 1, putative 186 300 - -
Pral5280g00097 1056 ProSiteProfiles Heavy-metal-associated domain profile. 14 80 IPR006121 GO:0046872
Pral5280g00097 1056 FunFam Putative cadmium/zinc-transporting ATPase 3 408 529 - -
Pral5280g00097 1056 SUPERFAMILY Calcium ATPase, transmembrane domain M 148 490 IPR023298 -
Pral5280g00097 1056 NCBIfam cadmium family heavy metal-translocating P-type ATPase 148 701 - -
Pral5280g00097 1056 NCBIfam HAD-IC family P-type ATPase 171 675 IPR001757 GO:0005215|GO:0005524|GO:0016020|GO:0016887
Pral5280g00097 1056 CDD P-type_ATPase_HM 99 699 - -
Pral5280g00097 1056 SUPERFAMILY Calcium ATPase, transduction domain A 211 296 IPR008250 -
Pral5280g00097 1056 MobiDBLite consensus disorder prediction 729 748 - -
Pral5280g00097 1056 FunFam Putative cadmium/zinc-transporting ATPase 3 10 83 - -
Pral5280g00097 1056 MobiDBLite consensus disorder prediction 731 746 - -
Pral5280g00097 1056 NCBIfam heavy metal translocating P-type ATPase 148 699 IPR027256 GO:0006812|GO:0016020|GO:0019829
Pral5280g00097 1056 SUPERFAMILY HMA, heavy metal-associated domain 11 85 IPR036163 GO:0046872
Pral5280g00097 1056 ProSitePatterns Hypothetical cof family signature 2. 597 619 - -
Pral5280g00097 1056 SUPERFAMILY HAD-like 396 698 IPR036412 -
Pral5280g00097 1056 PRINTS P-type cation-transporting ATPase superfamily signature 621 633 - -
Pral5280g00097 1056 PRINTS P-type cation-transporting ATPase superfamily signature 397 411 - -
Pral5280g00097 1056 PRINTS P-type cation-transporting ATPase superfamily signature 246 260 - -
Pral5280g00097 1056 PRINTS P-type cation-transporting ATPase superfamily signature 521 532 - -
Pral5280g00097 1056 PRINTS P-type cation-transporting ATPase superfamily signature 543 553 - -
Pral5280g00097 1056 PRINTS P-type cation-transporting ATPase superfamily signature 597 616 - -
Pral5280g00097 1056 Gene3D - 185 300 - -
Pral5280g00097 1056 Gene3D - 388 648 IPR023214 -
Pral5280g00097 1056 PANTHER CADMIUM/ZINC-TRANSPORTING ATPASE HMA2-RELATED 10 702 - -
Pral5280g00097 1056 Pfam E1-E2 ATPase 207 376 - -
Pral5280g00097 1056 SFLD p-type atpase 380 649 IPR044492 -
Pral5280g00097 1056 Gene3D - 408 529 IPR023299 GO:0000166
Pral5280g00097 1056 PRINTS H+-transporting ATPase (proton pump) signature 629 654 IPR001757 GO:0005215|GO:0005524|GO:0016020|GO:0016887
Pral5280g00097 1056 PRINTS H+-transporting ATPase (proton pump) signature 597 613 IPR001757 GO:0005215|GO:0005524|GO:0016020|GO:0016887
Pral5280g00097 1056 PRINTS H+-transporting ATPase (proton pump) signature 570 586 IPR001757 GO:0005215|GO:0005524|GO:0016020|GO:0016887
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral5280g00097 Pral-Chr5280 942973 954313 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral5280g00097 11 716 Primary Pumps ATPases AT4G30110 67.185 0.0 996
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral5280g00097 K01534 - gmx:100817567 1290.4