Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral5280g00076 ATGGAAAGATTCCTCAACAACATCGACCAAGAGGAACCCGTCAGATTCTCACCGGAGCAACTTGGCCAAATCACAAACAACAACACCACTGTTCTGGGGTCTGGTGCTTTTGGAGAGGTTTGTAAAAGTGAATTGTCAAATGGACAGCAAGTTGCAGTGAAAGTTCTCAAAAGTTTGGATCCTGGGACAGAAGAGCAATTCAAAGCAGAAGTTAGCACTATTGGAAGAACTTACCATATCAATGTAGTTACGCTTTATGACTTCTGCTCCCACCGTGACAAGAGAGCTCTTATATACGAGTTTGTGCAAAATGGGTCTCTCAACAACTTATTATTTGGCAGTCTGAGCACAGAAATCCAGTGTGGGAAGCTTCATGAGATTGCAATTGGAACAGCAAAAAGAATTGACTACTCACATGAAGAGTGTCAACAAAGAGTCATTCTTTACGCTATTAAACCGGAGAATATACTTCTGGGCCTGAACTTGGAACCACAAGTTGCAGACTTTGGTCTTCCAGTCTGTCTAGTAAATAAGCCTTTTTAA 543 0.4162 MERFLNNIDQEEPVRFSPEQLGQITNNNTTVLGSGAFGEVCKSELSNGQQVAVKVLKSLDPGTEEQFKAEVSTIGRTYHINVVTLYDFCSHRDKRALIYEFVQNGSLNNLLFGSLSTEIQCGKLHEIAIGTAKRIDYSHEECQQRVILYAIKPENILLGLNLEPQVADFGLPVCLVNKPF 180
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral5280g00076 180 Gene3D Transferase(Phosphotransferase) domain 1 102 178 - -
Pral5280g00076 180 Pfam Protein kinase domain 30 172 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pral5280g00076 180 ProSiteProfiles Protein kinase domain profile. 26 180 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pral5280g00076 180 Gene3D Phosphorylase Kinase; domain 1 9 101 - -
Pral5280g00076 180 ProSitePatterns Protein kinases ATP-binding region signature. 32 54 IPR017441 GO:0005524
Pral5280g00076 180 PANTHER OS07G0415500 PROTEIN 3 172 - -
Pral5280g00076 180 SUPERFAMILY Protein kinase-like (PK-like) 13 176 IPR011009 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral5280g00076 Pral-Chr5280 700863 701405 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral5280g00076 15 178 Receptor kinase-like Gene Family AT5G38280 41.212 2.73e-40 142
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-Os Pral5280g00076 Pkinase 1.9e-22 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral5280g00076 - - pcin:129320890 259.996