Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral5280g00074 ATGGCTTCTGGTGTTGTGGTAGGAATTGCTGTTGTTGGCTTCATGGTAATTCTGACTGCGATTTTTTGGAGCGCAACTATGTCTTGTTACCTTCGTCGGTCCCAGGTTATTGCACACCAAGAATTTCTGACTTACACTATGTACAAGTTTCTGCATGAAATGGAAAGGGAAAAGCCAATCAGGTTCACCTCACATGTTCTGATGCTTGCAACTAACAATTATTCCAACATGTTGGGTTCAGGTGGTTTTGGATCAGTCTATAAAGGGACTTTCAGTGATGGAACCATCGTGGCTGTGAAGGTTTTGAATGGGAGCTCAGACAAGAGAATGGAGGAGCAGTTCATGGCAGAAGTAGGCACAATTGGAAGAGTTCATCATGTCAATCTACTTCGCCTCTATGGATTTTGCATAGAAGGGAATATAAGGGCACTAGTTTATGAGTTCATGGGCAACGGCTCACTTGACAAGTATCTATTTAAGGAAAACCAGAGGTTGGAATTTAAAAAACTTCATGAGATTGCAGTTGGAACAGCCAAAGGAATTTCTTATTTGCATGAAGAATGCCAACAGAGAATTGTCCACTATGACATAAAACCAGAAAACATCCTCTTGGACGACAACTTCTATCCTAAAGTTGCAGACTTTGGTTTGGCCAAGCTTTGTAACAGAGAAAATACTCATATCACCATGACCGGAGGTAGAGGGACTCCCGGTTATGCTGCTCCGGAGCTCTGGATGCCATTTCCAGTAACTTACAAGTGTGATGTTTACAGCTTTGGAATGTTGTTATTCGAAATCATAGGTAGGAGAAGGAATCTTGATGTTAACCTTACAGAAGAAAGTAAAGAGTGGTTTCCAAGATGGGTTTGGATCAAATTTGATAATGGAGAACTTAATGAAATGATAAGAGTTTGTGGAATAGAGGAGGAAGATAAAGAGATGGCAGAAAGAATGGTTAAGATAGCTCTTTGGTGTGTTCAGTATAAACCTCAACTGAGGCTTATGATGAGTGTTGTGGTGAAAATGTTGGAGGGTTCAGAAGAAATCCCAGAACCTGTGAATCCTTTTCAGCACTTCATGGATGGAAGTTATTCTGTAGAATCGGTTCAGGCAACACAGACTGATACTAGTTTTGCTTCTGGTTCTTCAATTACAGCATCTAAACCTAGCACTGTGAATGCTACTCCTATCATGAGTAAGTATGAGATCCAAATAGCCTCTAGCCAGGATTAA 1233 0.4079 MASGVVVGIAVVGFMVILTAIFWSATMSCYLRRSQVIAHQEFLTYTMYKFLHEMEREKPIRFTSHVLMLATNNYSNMLGSGGFGSVYKGTFSDGTIVAVKVLNGSSDKRMEEQFMAEVGTIGRVHHVNLLRLYGFCIEGNIRALVYEFMGNGSLDKYLFKENQRLEFKKLHEIAVGTAKGISYLHEECQQRIVHYDIKPENILLDDNFYPKVADFGLAKLCNRENTHITMTGGRGTPGYAAPELWMPFPVTYKCDVYSFGMLLFEIIGRRRNLDVNLTEESKEWFPRWVWIKFDNGELNEMIRVCGIEEEDKEMAERMVKIALWCVQYKPQLRLMMSVVVKMLEGSEEIPEPVNPFQHFMDGSYSVESVQATQTDTSFASGSSITASKPSTVNATPIMSKYEIQIASSQD 410
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral5280g00074 410 ProSiteProfiles Protein kinase domain profile. 72 357 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pral5280g00074 410 ProSitePatterns Serine/Threonine protein kinases active-site signature. 192 204 IPR008271 GO:0004672|GO:0006468
Pral5280g00074 410 Gene3D Transferase(Phosphotransferase) domain 1 149 354 - -
Pral5280g00074 410 PANTHER OS07G0415500 PROTEIN 6 356 - -
Pral5280g00074 410 SMART serkin_6 72 343 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pral5280g00074 410 SUPERFAMILY Protein kinase-like (PK-like) 56 344 IPR011009 -
Pral5280g00074 410 Pfam Protein tyrosine and serine/threonine kinase 75 343 IPR001245 GO:0004672|GO:0006468
Pral5280g00074 410 ProSitePatterns Protein kinases ATP-binding region signature. 78 100 IPR017441 GO:0005524
Pral5280g00074 410 FunFam serine/threonine-protein kinase PBS1-like 45 148 - -
Pral5280g00074 410 FunFam Putative receptor-like protein kinase 149 351 - -
Pral5280g00074 410 Gene3D Phosphorylase Kinase; domain 1 47 148 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral5280g00074 Pral-Chr5280 691176 692629 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral5280g00074 1 353 Receptor kinase-like Gene Family AT1G66910 38.292 2.32e-79 256
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-Os Pral5280g00074 PK_Tyr_Ser-Thr 3.2e-47 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral5280g00074 - - gmx:100803355 558.14