Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral5280g00073 ATGAATAATAAGGGGACTCGTCTTGCAACTTCTGTCATTGTTAACAACACAGTTAAAGGAAATAACAACTTCAATATAGTGGTAAATCTTCCTGTTTTGGAATTGGGAGTCCCGCCTCCTAATTCTTGGCCTTCCCGAAGTCCTCCACAAAATCATACACATTTGCATGAACCACCCTTATTGCAGCACAAGCGTGTGGACATGGAATCCCTGTCATTTTTTCTGCATAAAATGGAAAGGGAAAAGCCAATCAGGTTCAATTCACATGTTCTGATGCTTGCAACTAACAATTATTCCAACATGTTGGGTTCAGGTGGTTTCGGATCAGTCTATAAAGGGATTTTCAGTGATGGAACCATCGTGGCTGTGAAGTTTTTGAATGGGAGCTCAGACAAGAGAATGGAGAAGCAGTTCATGGCAGAGGCACTAGTTTATGAGTTCATGGGCAACGGCTCACTTGACAAGTATCTATTTAAGGAAAACAAGAGGTTGGGATTTAAAAAGCTTCATGAGATTGCCGTTGGAACAGCCAAAGGAATTTCTTATTTGCATGAAGAATGCCAACAGAGAATTGTCCACTATGACATAAAACCAGAAAACATCCTCTTGGACGATAACTTCTATCCTAAAGTTGCTGACTTTGGTTTGGCCAAGCTTTGTAATAGAGAAAATACTCATATCACCATGACCGGAGGTAGAAGGACTCCCGGTTATGCTGCGCCGGAGCTCTGGATGCCGTTTCCGATAACTTACAAGTGTGATGTTTACAGCTTTGGAATGTTGTTATTTGAAATCATAGGTAGGAGAAGGAATCTTGATGTTAACCTGACAGAAGAAAGTAAAGAGTGGTTTCCAAGATGGGTTTGGATCAAATTTGATAATGGAGAACTAAATGAAATGATAAGAGTGTGTGGAATAGAGGAGGAAAATAAGGATATGGCAGAAAGAATGGTTAAGATAGCTCTTTGGTGTGTTCAGTATAAACCTGAACTGAGGCCTATGATGAGTGTTGTGGTGAAAATGTTGGAGGGTTCAGAGGAAATCCCAGAGCCTGTGAATCCTTTTCAGCACTTCATGGATGGAAGTTATTCTGTAGAATCAGTTCAGACAACACAGACTGATACTAGTTTTGCTTCTGGTTCCTCTATTACAGCATCTAAACCTAGCACTGTGAATGCTACTCCTATAATGAGCAAGTATGAGAGCCAAATAGCCTCTAGCCAGGATTAA 1230 0.4065 MNNKGTRLATSVIVNNTVKGNNNFNIVVNLPVLELGVPPPNSWPSRSPPQNHTHLHEPPLLQHKRVDMESLSFFLHKMEREKPIRFNSHVLMLATNNYSNMLGSGGFGSVYKGIFSDGTIVAVKFLNGSSDKRMEKQFMAEALVYEFMGNGSLDKYLFKENKRLGFKKLHEIAVGTAKGISYLHEECQQRIVHYDIKPENILLDDNFYPKVADFGLAKLCNRENTHITMTGGRRTPGYAAPELWMPFPITYKCDVYSFGMLLFEIIGRRRNLDVNLTEESKEWFPRWVWIKFDNGELNEMIRVCGIEEENKDMAERMVKIALWCVQYKPELRPMMSVVVKMLEGSEEIPEPVNPFQHFMDGSYSVESVQTTQTDTSFASGSSITASKPSTVNATPIMSKYESQIASSQD 409
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral5280g00073 409 SUPERFAMILY Protein kinase-like (PK-like) 86 374 IPR011009 -
Pral5280g00073 409 ProSiteProfiles Protein kinase domain profile. 96 356 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pral5280g00073 409 ProSitePatterns Protein kinases ATP-binding region signature. 102 124 IPR017441 GO:0005524
Pral5280g00073 409 SMART serkin_6 96 342 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pral5280g00073 409 FunFam Putative receptor-like protein kinase 148 350 - -
Pral5280g00073 409 Gene3D Transferase(Phosphotransferase) domain 1 149 353 - -
Pral5280g00073 409 ProSitePatterns Serine/Threonine protein kinases active-site signature. 191 203 IPR008271 GO:0004672|GO:0006468
Pral5280g00073 409 Pfam Protein tyrosine and serine/threonine kinase 143 342 IPR001245 GO:0004672|GO:0006468
Pral5280g00073 409 Gene3D Phosphorylase Kinase; domain 1 73 148 - -
Pral5280g00073 409 PANTHER G-TYPE LECTIN S-RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE SD2-5 78 141 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral5280g00073 Pral-Chr5280 677014 683274 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral5280g00073 95 352 Receptor kinase-like Gene Family AT1G66930 43.333 4.36e-62 209
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-Os Pral5280g00073 PK_Tyr_Ser-Thr 3e-30 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral5280g00073 - - gmx:100803355 489.189