Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral5280g00071 ATGAATTCCAATATGAAATGGGCTCTAACTGAGTGTCTTGTTGTAGGGACGGTGATGATAATTGCTATTATAACAATAGCATACTCAATTCTTCAGTGCTTGAAGAAAGTAGGAACAATGATGTCAGCTTATACCCAGATTCCAACGGTAGATAAGGACAATAAAGCCTTAATCTCAGATACTTCAGACAATAGAGAAATGGCATTAGCAATACCTCCAAATTCGGAAGTAAAGTTTGCAACTATGGAAAGGTTCCTCAACTGCATCAACAAAGAAAAACCCATCAGGTTCTCACCTGAGGAACTTGAAAGAATCACAAAGAACTACACCACTATTTTGGGGTTTGGAGCTTATGGGCTGGTTTACAAAGGTGAATTGTCAAGTGAAGAGAAAGTTGCAGTAAAAGTTCTGAACAGCTTGGATCTTGGGACAGAGGAGCAATTTAAGGCAGAAGTTAGCACTATTGGAAGAACTTATCACATTAATCTAGTCAGGCTATATGGCTTCTGCTTCACACATAACAGGAGAGCTCTTGTATATGAGTATGTACCAAATGGTTCTCTCAACAATTTATTATTTAGTAATCTCAACAAAAAAGTTGAGTTGGGGAAGCTTCTTGAGATTGCAATAGGAATAGCGAAAGGGATTGCTTACTTACATGAAGAGTGTCAACATAGAATCATTCATTATGATATTAAACCAGAGAATATACTTCTTGGCCTGAAATTTGAACCAAAAGTGGCAGATTTTGGTCTTGCAAAACTTTGCACCGGAGAAAGAAGCCATGTGAATATGTCAGACTTCAGAGGAACAAGAGGGTATGCTGCACCAGAATTGTGGAAGCTTTGTCCTGTGAATCATAAGTGTGATGTTTATAGCTTTGGTATTGTTCTCTTCGAAATTGTGGGGAGGAGAAGGCATTTTGATAGTGGCTGCAGTGAATCACAGCAATGGCTTCCGAAATGGACATGGGATATGTTTGAGAACAATGAATTACCAGTGATGCTTTCACTGTGTGGGATTGAAGAAGAGAAAGACACGGAAAAAGCTCAGAGAATGTTAATGGCGGCCCTTTGGTGTGTTCAATATTTGCCTACTGATAGACCTCTTATGAGTAATGTGGTGAAGATGCTGGAGGGTGATATAGAAATCCCTCCCCCACCATTTCCCTTTCAGAATTTGGTGTCCTCTAAACCATATCTGACTCTGCAGGGAACCAATGAAGATTCAGATGCTTCTTCTTCATAG 1248 0.395 MNSNMKWALTECLVVGTVMIIAIITIAYSILQCLKKVGTMMSAYTQIPTVDKDNKALISDTSDNREMALAIPPNSEVKFATMERFLNCINKEKPIRFSPEELERITKNYTTILGFGAYGLVYKGELSSEEKVAVKVLNSLDLGTEEQFKAEVSTIGRTYHINLVRLYGFCFTHNRRALVYEYVPNGSLNNLLFSNLNKKVELGKLLEIAIGIAKGIAYLHEECQHRIIHYDIKPENILLGLKFEPKVADFGLAKLCTGERSHVNMSDFRGTRGYAAPELWKLCPVNHKCDVYSFGIVLFEIVGRRRHFDSGCSESQQWLPKWTWDMFENNELPVMLSLCGIEEEKDTEKAQRMLMAALWCVQYLPTDRPLMSNVVKMLEGDIEIPPPPFPFQNLVSSKPYLTLQGTNEDSDASSS 415
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral5280g00071 415 SUPERFAMILY Protein kinase-like (PK-like) 90 379 IPR011009 -
Pral5280g00071 415 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase 183 388 - -
Pral5280g00071 415 PANTHER G-TYPE LECTIN S-RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE SD2-5 17 389 - -
Pral5280g00071 415 Gene3D Transferase(Phosphotransferase) domain 1 183 383 - -
Pral5280g00071 415 Pfam Protein kinase domain 111 375 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pral5280g00071 415 SMART serkin_6 107 378 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pral5280g00071 415 Gene3D Phosphorylase Kinase; domain 1 81 182 - -
Pral5280g00071 415 ProSitePatterns Protein kinases ATP-binding region signature. 113 135 IPR017441 GO:0005524
Pral5280g00071 415 FunFam S-receptor-like serine/threonine-protein kinase 77 182 - -
Pral5280g00071 415 ProSitePatterns Serine/Threonine protein kinases active-site signature. 227 239 IPR008271 GO:0004672|GO:0006468
Pral5280g00071 415 ProSiteProfiles Protein kinase domain profile. 107 401 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral5280g00071 Pral-Chr5280 645882 647392 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral5280g00071 96 415 Receptor kinase-like Gene Family AT5G38280 40.426 1.13e-81 262
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-Os Pral5280g00071 Pkinase 5.2e-44 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral5280g00071 - - pcin:129320890 666.766