Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral5280g00067 ATGAGTTTTGTGTTTTCTCCACCGTCTTTTCATAGTTCATACGATGGTTTTCAGACACAAGCCCAAACTTCGTTCGATAAATTCGATGACAACTTTAATTCTACGATGAAATGGGCAGTGGCTGGGTCTATTGTTTATCTGTTGGTGGTGATAATGGCCATTATAGCAGTAGTATACGCCATTGTTCAGTGCTTGAAGAAAGCAGGATCAGTGATTCCAGCTTACACCCAGATTCCAAATACAGATAATGACCATAAAGCTTCAAATTCACCTCCTTCAAACAACAAAGAAATTGCATTAGCAATGCCACCAGATTCACAAGTGGAGTTTGCAACTATGGAAAGATTCCTCGACAACATCAACCAAGAGAAACCCATCAGATTCTCACCTGAGGAACTTGAAGAAATCACAAAGAACTACACCACTGTTTTGGGGTCAGGTGCTTTTGGGGTGGTTTATGAAGGTGAATTGTCAAATGGACAGCAAGTTGCGGTGAAAGTTCTCAACAGTTTGGATCTTGGTACAGAAGAGCAATTCAGGGCAGAAGTTAGCACCATAGGAAGAACTTACCATATCAATTTAGTTACGCTCTATGGCTTTTGCTTCCACCGTGAAAAGAGAGCTCTTGTATATGAGTATGTGCAAAATGGGTCTCTCAACAATTTATTATTTGGCAGTCTGAACAGAGAAGTTGAGTTTGGGAAGCTTCATGAGATTGCCATTGGAACCGCAAAAGGAATTGCTTACTTACATGAAGAGTGTCAACATAGGATCATTCATTATGATATTAAACCAGAGAACATACTTCTTGGCTTGAACTTGGAACCAAAAGTAGCCGATTTTGGTCTTGCAAAACTTTGCAGCAGAGAAAGCAGCCATGTCAATATGACACACTTCAGAGGAACAAGAGGATATGCTGCACCAGAATTGTGGAAGTGTTCTCCTGTGAATTACAAGTGTGATGTTTATAGTTTTGGTATTATTCTCTTTGAGATTGTGGGGAGGAGAAGGCATTTTGATAGTGGCTGCAGTGAATCACAGCAATGGCTTCCGAAATGGACATGGGATATGTTTGAGAACAATGAATTACCAGTGATGCTTTCACTGTGTGGAATTGAAGAGAGAGACCGGGAAAAAGCAAAGAGAATGTTAATGGTGGCCCTTTGGTGTGTTCAATATTTGCCTACTGATAGACCTCTTATGAGTAACGTGGTAAAGATGTTAGAGGGTGACATAGAAGTCCGTCCACCACCATTTCCCTTTCAGAATTTGGTGTCTTGTTTGCCACCACTGACTTCGCAGGGAACCAATGAAGGCTTAGATGCTTCTACTTCATGGGTGACAGAATCTTCTGAACAATCTAATTCTAAACCAGCCAACAAGATATTCCATATAGAAAAATCTGCATAG 1410 0.4064 MSFVFSPPSFHSSYDGFQTQAQTSFDKFDDNFNSTMKWAVAGSIVYLLVVIMAIIAVVYAIVQCLKKAGSVIPAYTQIPNTDNDHKASNSPPSNNKEIALAMPPDSQVEFATMERFLDNINQEKPIRFSPEELEEITKNYTTVLGSGAFGVVYEGELSNGQQVAVKVLNSLDLGTEEQFRAEVSTIGRTYHINLVTLYGFCFHREKRALVYEYVQNGSLNNLLFGSLNREVEFGKLHEIAIGTAKGIAYLHEECQHRIIHYDIKPENILLGLNLEPKVADFGLAKLCSRESSHVNMTHFRGTRGYAAPELWKCSPVNYKCDVYSFGIILFEIVGRRRHFDSGCSESQQWLPKWTWDMFENNELPVMLSLCGIEERDREKAKRMLMVALWCVQYLPTDRPLMSNVVKMLEGDIEVRPPPFPFQNLVSCLPPLTSQGTNEGLDASTSWVTESSEQSNSKPANKIFHIEKSA 469
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral5280g00067 469 MobiDBLite consensus disorder prediction 437 461 - -
Pral5280g00067 469 FunFam Putative receptor-like protein kinase 214 416 - -
Pral5280g00067 469 ProSiteProfiles Protein kinase domain profile. 138 419 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pral5280g00067 469 PANTHER G-TYPE LECTIN S-RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE SD2-5 41 419 - -
Pral5280g00067 469 SMART serkin_6 138 408 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pral5280g00067 469 ProSitePatterns Protein kinases ATP-binding region signature. 144 166 IPR017441 GO:0005524
Pral5280g00067 469 FunFam S-receptor-like serine/threonine-protein kinase 108 213 - -
Pral5280g00067 469 ProSitePatterns Serine/Threonine protein kinases active-site signature. 258 270 IPR008271 GO:0004672|GO:0006468
Pral5280g00067 469 MobiDBLite consensus disorder prediction 437 462 - -
Pral5280g00067 469 Gene3D Phosphorylase Kinase; domain 1 111 213 - -
Pral5280g00067 469 MobiDBLite consensus disorder prediction 79 96 - -
Pral5280g00067 469 Gene3D Transferase(Phosphotransferase) domain 1 214 415 - -
Pral5280g00067 469 MobiDBLite consensus disorder prediction 79 99 - -
Pral5280g00067 469 Pfam Protein kinase domain 142 406 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pral5280g00067 469 SUPERFAMILY Protein kinase-like (PK-like) 120 409 IPR011009 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral5280g00067 Pral-Chr5280 638619 643231 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral5280g00067 127 421 Receptor kinase-like Gene Family AT5G38280 40.728 2.34e-80 261
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-Os Pral5280g00067 Pkinase 5.9e-46 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral5280g00067 - - pcin:129320890 798.505