LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Pral5280g00048	ATGCAGCGGAACGCAATTGGTATGGGAAAAAGGACACTGGAGGGTGGGGAAGATGAGCAGCCTGAAAGGAAGAGGCCTGCTCTTGCCAGCGTAATTGTAGAAGCTCTCAAAGTGGACAGTTTGCAGAAGCTTTGCTCATCATTGGAACCTATCCTTCGTCGAGTTGTTAGTGAGGAAGTGGAACGTGCGTTGGCGAAGTTAGGTCCTGCAAGACTGAGTGGAAGGTCCCCACCAAAAATGATTGAAGGTCCAGATGGAAGAAACTTGCGGCTCCATTTTAGATCCCGGCTATCTCTTCCTCTTTTCACTGGAGGAAAAGTGGAAGGCGAGCAGGGTGCAGCAATTCATGTTGTTCTGATTGATGCTAACACTGGAAATGTTGTAACATCTGGATCTGAAGCTTGTACAAAACTTGATGTTGTCGTCCTTGAAGGTGATTTTAATAATGAAGATGATGAAGACTGGACGCAAGAAGAATTTGAAAGCCATGTGGTGAAAGAGCGTGAAGGTAAGAGACCTTTGTTGACTGGGGACCTTCAGGTGACACTCAAGGAAGGTGTTGGAACAGTGGGTGAGCTGACATTTACTGATAATTCAAGTTGGATAAGGAGCCGCAAATTTAGGCTTGGCTTGAAGGTTGCCCCAGGTTTTTGTGAATCCATTCGCATCCGTGAAGCTAAGACAGAGGCTTTCACTGTCAAAGATCACAGAGGAGAATTGTATAAGAAGCATTATCCACCTGAACTGAACGATGAAGTATGGAGGTTGGAGAAGATTGGAAAAGATGGATCATTTCACAAGAAACTTAATAGTAATGGAATATTCACAGTTCAAGACTTTCTTCGACTTGTAGTCAAAGACCAACAGAAATTACGGAATATCCTTGGAAGTGGCATGTCAAACAAAATGTGGGATGCTCTCTTAGAACATGCAAAGACATGTATTTTAAGCGGGAAGCTCTATGTTTATTATCCAGAAGATACAAGAAATGTTGGTGTTGTTTTTAACAACATCTATGAGCTGCGTGGCCTTATTTCTGGAGAACAATTTTATTCTGCTGATTCTCTTTCTGATAGCCAGAAGGTTTATGTAGATTGCTTAGTAAAGAAGGCATATGAGAGCTGGGATCAAGTTGTAGAGTATGATGGCAAATCATTCTTACCTAGCAATGATTTAGATCATCAACAGCCACAGTCTGCCCTCCCCGTTACAGTGCCTTCTGAGCAGCAATTTAATTCAGGACTGCCTGTTGGAGGTTATAATGATGGTCTGGCTATCACATACCCAAGTCAGCCCCTGATTTCAAACTCCAACTCTCGGAACCAGTTTGACAGCAGTTCATTTGTATCTCAGGATCAATTACTCAGCAATGCCCATCAAGCACACAACTCCCGAAACGATCATGGTCCAGTTGGCTTGGCCCTTGGTCCTCCTCAGCCATCAACATCAGGGTTCCATGCTGGAACCTCTTCAATTCAGCCTTCAACTTTGAATCCTTTCGAGGAGTGGTCTAATAACAGGGACAGAGGGGTCGATGAATTCCTTTCAGAGGAAGAAATTCGGATGAGAAGCCATGAGATGCTGGAAAATGAAGATATGCAGCACCTGCTTCGCCTCTTCAGCATGGGGGGTCATGCCCCCTTAAATATCCAAGAAGACGGCTATGCATTCCCGCCATACGTGGCATCACCCATGCCAAACTTTGATGAGGATCGTGCTCGTCCTGGCAAAGCTGTTGTGGGATGGCTGAAGATCAAGGCAGCAATGAGGTGGGGCTTCTTTATTCGGAAGAAAGCAGCTGAGAGGCGGGCACAGATAGTGGAGTTGGATGATGAATAG	1839	0.4492	MQRNAIGMGKRTLEGGEDEQPERKRPALASVIVEALKVDSLQKLCSSLEPILRRVVSEEVERALAKLGPARLSGRSPPKMIEGPDGRNLRLHFRSRLSLPLFTGGKVEGEQGAAIHVVLIDANTGNVVTSGSEACTKLDVVVLEGDFNNEDDEDWTQEEFESHVVKEREGKRPLLTGDLQVTLKEGVGTVGELTFTDNSSWIRSRKFRLGLKVAPGFCESIRIREAKTEAFTVKDHRGELYKKHYPPELNDEVWRLEKIGKDGSFHKKLNSNGIFTVQDFLRLVVKDQQKLRNILGSGMSNKMWDALLEHAKTCILSGKLYVYYPEDTRNVGVVFNNIYELRGLISGEQFYSADSLSDSQKVYVDCLVKKAYESWDQVVEYDGKSFLPSNDLDHQQPQSALPVTVPSEQQFNSGLPVGGYNDGLAITYPSQPLISNSNSRNQFDSSSFVSQDQLLSNAHQAHNSRNDHGPVGLALGPPQPSTSGFHAGTSSIQPSTLNPFEEWSNNRDRGVDEFLSEEEIRMRSHEMLENEDMQHLLRLFSMGGHAPLNIQEDGYAFPPYVASPMPNFDEDRARPGKAVVGWLKIKAAMRWGFFIRKKAAERRAQIVELDDE	612

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Pral5280g00048	612	PANTHER	OS02G0177800 PROTEIN	10	533	IPR012416	GO:0005516
	Pral5280g00048	612	Pfam	Calmodulin binding protein central domain	249	314	IPR046830	-
	Pral5280g00048	612	Pfam	Calmodulin binding protein C-terminal domain	319	381	IPR046829	-
	Pral5280g00048	612	MobiDBLite	consensus disorder prediction	1	25	-	-
	Pral5280g00048	612	Pfam	Calmodulin binding protein-like N-terminal domain	89	236	IPR046831	-

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Pral5280g00048	Pral-Chr5280	466199	472636	Tandem

Functional genes information

Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Pral5280g00048	4	607	Calmodulin-binding Proteins	AT5G57580	67.293	0.0	854

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Pral5280g00048	-		-	gmx:100790087	1010.75