Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral5280g00028 ATGGAACAATATAAGGAGTTCTTAGATAAAGGAAGCCGTAAAGGTGGTGTTGATGCTATTTTTTATGAAGTTCCCTACATCAAAGTGTTCCTCAAAGAATACGGTTCTAATTATGCCATGATTGAAACTAGGCACCGCACTGATGGATTTGGTTTCGCATTCCCCAAAGGCTCCACATTAACTTCACACTTTTCCAGAGCCATATTGAATGTGCGCGAGAGTCCAGAAATGGATGAAATTGAGCATAAATATTTTGGAAGCAGTAACAACGATGAAGGCCAAAGCCCATCTAATTCATCGTTAGATGATGCAAGTTCAAGCAGCCTCACTACTTATAGCTTTGCAGGTTTGTTCATGTTAATTGGAGTTTTTTCACTGTCAGCTTTGATAGTCTCTGAAAGTCGTATTTGGCAAAAACCTATTATAGCAGCAAAAATGTATATCCAAAGATTCTTGAGTCGGAGGTTCACAAGAACCAATCCATTAGAGGAAGGTTCTACGACAAGAAGAAATAATGTTGATAGAGAAGAAAATATATCAGAAGACAGAGCAGATGACCAAGGAAAACTGTCTATAGCATCTCTTACATGTGGGGATACCCAAACATTGCCTGTGTAA 618 0.3867 MEQYKEFLDKGSRKGGVDAIFYEVPYIKVFLKEYGSNYAMIETRHRTDGFGFAFPKGSTLTSHFSRAILNVRESPEMDEIEHKYFGSSNNDEGQSPSNSSLDDASSSSLTTYSFAGLFMLIGVFSLSALIVSESRIWQKPIIAAKMYIQRFLSRRFTRTNPLEEGSTTRRNNVDREENISEDRADDQGKLSIASLTCGDTQTLPV 205
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral5280g00028 205 PANTHER IONOTROPIC GLUTAMATE RECEPTOR 4 159 IPR015683 -
Pral5280g00028 205 Pfam Bacterial extracellular solute-binding proteins, family 3 13 86 IPR001638 -
Pral5280g00028 205 Gene3D - 4 50 - -
Pral5280g00028 205 MobiDBLite consensus disorder prediction 168 185 - -
Pral5280g00028 205 SUPERFAMILY Periplasmic binding protein-like II 14 87 - -
Pral5280g00028 205 Gene3D - 51 85 - -
Pral5280g00028 205 MobiDBLite consensus disorder prediction 162 185 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral5280g00028 Pral-Chr5280 306053 306779 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral5280g00028 2 131 Ion Channels AT5G11210 40.000 1.11e-23 96.3
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral5280g00028 K05387 - pcin:129319408 213.772