Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral5280g00017 ATGTTAACTGTACAGAGTTTGCAGCCTAAGTTCATCGATGTAAAAGACATAAAAAATAATAATTACTGTGTGGGATATCAGAAGGGGTCCTTCATCAAAAGGCTTCTGAAAAATCAATTGGGATTCACAGAGTCAAAGTTGAAGCCATACGAGACGCCTGAAGAACATGAACGAGCTCTCTCCAGTGGTGAGATTGCTGCTTTCTTTGATGAAACCCCCTACGTGAAGCTCTTCCTCACAAGATACGGCTCCAAGTATGCTATGGTGGGGCCAACTTACAAGACTGCTGGATTTGGCTTCGCATTTCCACTAAGATCTCCGTTGGTATCTTATTTTTCAAGGGCAATCCTAAATGTGACTCAAGATGAAGAAAAATTTGAGAGGATTAGGGCCAAGTACTTCTCCAGCAAAATCATATCTGAAGATGAAAGCGGATCATCAATCCCGCACAGTCAGACTAGTCTTACTGTGTCCAGCTTTGGATTTCATCACCACAGGGGTCGCTTCTGGGATTTCACTTCTGTTCTATTTGTTTAA 537 0.4209 MLTVQSLQPKFIDVKDIKNNNYCVGYQKGSFIKRLLKNQLGFTESKLKPYETPEEHERALSSGEIAAFFDETPYVKLFLTRYGSKYAMVGPTYKTAGFGFAFPLRSPLVSYFSRAILNVTQDEEKFERIRAKYFSSKIISEDESGSSIPHSQTSLTVSSFGFHHHRGRFWDFTSVLFV 178
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral5280g00017 178 Gene3D - 3 96 - -
Pral5280g00017 178 SUPERFAMILY Periplasmic binding protein-like II 3 137 - -
Pral5280g00017 178 PANTHER IONOTROPIC GLUTAMATE RECEPTOR 1 161 IPR015683 -
Pral5280g00017 178 Pfam Bacterial extracellular solute-binding proteins, family 3 10 135 IPR001638 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral5280g00017 Pral-Chr5280 164591 166612 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral5280g00017 2 169 Ion Channels AT2G29110 45.238 1.66e-37 134
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral5280g00017 K05387 - qsu:111985484 199.134