Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral5280g00015 ATGTTTCTGAAGAATCAGTTGGGATTCAAGGATGAGTCAAGGTTGAAACCATACGAGACGCCTGAAGAATATGATCGAGCTCTCGCTAGTGGTGAGGTCGCTGCTATCTTTGATGAAATCCCCTACGTGAGGCTCTTCCTCTCAAAATTCGGCTCCAAGTATGCTATGGTGGGGCCAACCTACCAAACTACTGGTCTCGGCTTCGCATTTCCACCAAAATCTCCGTTGGTGTCTTATTTTTCGAGGGCAATCCTAAATGTGACCCAAGATGAAGAAAAATTTGAAAGGATTAAGGGCAAGTACTTCTCTGTCGGAATCATATCTGAAAGCGAAAGGGGATCATCAATCCCAAACAGTCCCGTTAGTCTAACTGTATCCAGCTTTGGAGGGCTTTTCATCATCACAGGGGTCACTTGTGGGATTTCACTTTTGTTCTATTTGTTTAAGTTTGGGTACTCTCGGCTAGAAGGAAGATCTCTTTGGTTGTTGCAGTTAAAGGCTCGAATAGTGAAGTGCTTGGATCAAAAGAATAGGTCTTTATCTTTGAACAGAAGCAATCCAGAGTATACCCTGCAAGTAATATTGTAG 588 0.432 MFLKNQLGFKDESRLKPYETPEEYDRALASGEVAAIFDEIPYVRLFLSKFGSKYAMVGPTYQTTGLGFAFPPKSPLVSYFSRAILNVTQDEEKFERIKGKYFSVGIISESERGSSIPNSPVSLTVSSFGGLFIITGVTCGISLLFYLFKFGYSRLEGRSLWLLQLKARIVKCLDQKNRSLSLNRSNPEYTLQVIL 195
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral5280g00015 195 SUPERFAMILY Periplasmic binding protein-like II 10 106 - -
Pral5280g00015 195 Gene3D - 2 105 - -
Pral5280g00015 195 Pfam Bacterial extracellular solute-binding proteins, family 3 12 103 IPR001638 -
Pral5280g00015 195 PANTHER IONOTROPIC GLUTAMATE RECEPTOR 2 154 IPR015683 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral5280g00015 Pral-Chr5280 158986 160334 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral5280g00015 13 152 Ion Channels AT2G29110 41.958 9.64e-29 110
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral5280g00015 K05387 - pcin:129296550 193.741