Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral5280g00008 ATGCTCTCGAGATCTTGCTTGGACTTATTGAATTTGGTCTCCGTCGATGATTACCGAACTCTGAGCCGGATCCCAAACGACGTGATGCTCCCCGGAGTTGTGCCTAGATTCGAAGGCCGGGATGATGCCGATTCGGGTGCGGGTTCCGACGATATCGTCTCCTCTGTTCCGCAAGAACGCAGAATCATCGTCACCAATCAGTTGCCGATAAAATCGTTTCGTGACAACGAAACCAGAAAGTTGAGTTTCGAATTGGATAGTGATAGTCTCTATCTGCAGCTCAAAGACGGGCTTCCTTCCGACGTCGAAGTCATCTATGTGGGTTCGTTGAAAGCCGACATCGATCCATCGGAACAGGAAGAAGTGTCCCAAATATTGCTCGAAAAGTTCCGATGCGTGCCTGCGTTTTTACCCCTCGAGATTCAGAACAAGTTCTACCATGGATTCTGCAAGCATTACCTCTGGCCTCTGTTTCACTACATGTTACCTATGTCGCCGAGTCACGGTGCCCGTTTCGAACGCTCGCAGTGGAAAGCTTACGTTTACGCCAACAAGATTTTCGCCGATAAGGTGACGGAGGTCATAAACCCAGAGGAGGATTACGTTTGGATTCACGATTATCATCTCATGATCTTGCCTACCTTATTGAGAAGACGTTTTCACAGGGTCAAACTCGGATTTTTCCTTCACAGCCCATTTCCGTCTTCTGAAATCTACAGAACAATTCCAGTTCGTGATGATATCCTTCGGGCTTTGTTAAATTGCGATTTGGTCGGTTTCCACACGTTTGATTACGCCAGACATTTCTTGTCCTGTTGCAGTAGAATGCTGGGGTTGGATTATGAGTCGAAGAGGGGTTACATTGGGCTAGATTATTACGGTCGTACAGTGACGATCAAGATCTTGCCGGTAGGGATTCACATGGGTCAGCTCCAATCGTTGTTGTCGTTATCTCATACTGGAGATAGGATCAAAGAATTGAAGAAACAATATGGGGGGAAGATCGTTATTTTGGGAGTGGACGACATGGATTTGTAAGGTTTAAGCTTGAAGTTACTGGCTATGGGACAACTCCTGGAACTTCACGAAGATTTAAGGGGTAAAGTAGTTCTAGTCCAGATTCTGAACCCAGCAAGAAGCAGTGGGAAAGACATTCAAGATGTTCAGAATGAAACCAATTCCATCGCGAATGAGATCAATGACAAATACGGCGAACCTGGATACCAGCCAATCGTGTTCATTAACGGCCCTGTTTCGACGCAGGAGAAAGCATCGTACTATGCCATTTCCGAATGCTGCCTTGTGAATGCTGTGAGAGATGGTATGAATTTAGTTCCTTATAAGTACACTGTTTGTAGACAGGGAATCGAAGCAAATGATTCCACGAGTCCTAAACGAAGCGTCATCATAGTGTCTGAATTCATTGGTTGTTCCCCGTCTCTGAGCGGAGCAATCAGAGTGAACCCATGGAACATCGAAGACGTCGCAGAGGCTATGAATTCGGCGATTACGATGTCAGATGAAGAGAAACAATTGCGTCACGAAAAGCATTACAAGTACATAAGCTCGCATGATGTAGCCTACTGGGCCAGGAGTTTTGATCAGGATTTAGAGAGGGCTTGTAGAGAGCATTATCATAAAAGGTGTTGGGGTTTTGGTTTTGGCCTGGGGTTTAGAGTCGTCGCTCTTGATCCTACGTTCAGGAAGCTTTCAGCAGAAGGCATTCTATCTTCGTATAGAAACACACACAGCAGGTTGATCCTTTTAGACTACGATGGTACTATGATGCCCCAGGTTTCGGTAGACAAAACCCCAAACGAAGAGGTTATTTCTGTGTTGAATCGTTTATGTGGTGACCCCAGAAACGTAGTGTTTATAGTAAGTGGCAGAGATAAGAATTGTCTCAGCAAGTGGTTTTCTCCATGCGAGAGGTTGGGCCTCTCAGCAGAACATGGCTTCTTCACCAGGTGGAGTAGTGATAGTCCTTGGGAAACATGTGGGTTAGGAATGGATTTTGAGTGGAAAAAAGCTGTAGAACCTGTGATGGCGCATTATACAGAAGCAACCGATGGTTCTTTCATTGAAATAAAAGAGAGTGCTTTGGTTTGGCACCACCAAGATGCAGATCCTCATTTCGGATCCTGCCAAGAAAAAGAGCTTCTTGATCACCTCGAAAGCGTGCTAGCCAATGAACCAGTAGTAGTAAAAAGAGGACAACACATCGTTGAAGTAAAACCTCAGGGCGTGAGCAAAGGCATAGTAGTGGGGAATCTAATCTCAACGATGCTGAGTAAAGGAAAGGCACCAGATTTTCTTTTGTGCATAGGAGATGATAGGTCAGATGAAGATATGTTTGAGAGCATTGTTCGTTCCGCCTCTGATCAGACCCTACAAGCCATAACACATGTCTATGCCTGCACGGTGGGTCAGAAGCCAAGCATGGCAAAATATTATCTGGATGACACGGTTGAAGTCATCAATTTGCTCCAAGGACTAGCCTCTGCATCATGA 2511 0.4556 MLSRSCLDLLNLVSVDDYRTLSRIPNDVMLPGVVPRFEGRDDADSGAGSDDIVSSVPQERRIIVTNQLPIKSFRDNETRKLSFELDSDSLYLQLKDGLPSDVEVIYVGSLKADIDPSEQEEVSQILLEKFRCVPAFLPLEIQNKFYHGFCKHYLWPLFHYMLPMSPSHGARFERSQWKAYVYANKIFADKVTEVINPEEDYVWIHDYHLMILPTLLRRRFHRVKLGFFLHSPFPSSEIYRTIPVRDDILRALLNCDLVGFHTFDYARHFLSCCSRMLGLDYESKRGYIGLDYYGRTVTIKILPVGIHMGQLQSLLSLSHTGDRIKELKKQYGGKIVILGVDDMDLFXGLSLKLLAMGQLLELHEDLRGKVVLVQILNPARSSGKDIQDVQNETNSIANEINDKYGEPGYQPIVFINGPVSTQEKASYYAISECCLVNAVRDGMNLVPYKYTVCRQGIEANDSTSPKRSVIIVSEFIGCSPSLSGAIRVNPWNIEDVAEAMNSAITMSDEEKQLRHEKHYKYISSHDVAYWARSFDQDLERACREHYHKRCWGFGFGLGFRVVALDPTFRKLSAEGILSSYRNTHSRLILLDYDGTMMPQVSVDKTPNEEVISVLNRLCGDPRNVVFIVSGRDKNCLSKWFSPCERLGLSAEHGFFTRWSSDSPWETCGLGMDFEWKKAVEPVMAHYTEATDGSFIEIKESALVWHHQDADPHFGSCQEKELLDHLESVLANEPVVVKRGQHIVEVKPQGVSKGIVVGNLISTMLSKGKAPDFLLCIGDDRSDEDMFESIVRSASDQTLQAITHVYACTVGQKPSMAKYYLDDTVEVINLLQGLASAS 837
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral5280g00008 837 PANTHER TREHALOSE-6-PHOSPHATE SYNTHASE 54 835 IPR001830 GO:0003824|GO:0005992
Pral5280g00008 837 Pfam Glycosyltransferase family 20 60 539 IPR001830 GO:0003824|GO:0005992
Pral5280g00008 837 Gene3D - 588 820 IPR023214 -
Pral5280g00008 837 Gene3D - 669 748 - -
Pral5280g00008 837 NCBIfam trehalose-phosphatase 585 833 IPR003337 GO:0003824|GO:0005992
Pral5280g00008 837 SUPERFAMILY HAD-like 586 833 IPR036412 -
Pral5280g00008 837 FunFam Alpha,alpha-trehalose-phosphate synthase [UDP-forming] 6 715 837 - -
Pral5280g00008 837 FunFam Alpha,alpha-trehalose-phosphate synthase 314 523 - -
Pral5280g00008 837 CDD HAD_TPP 587 828 - -
Pral5280g00008 837 NCBIfam HAD-IIB family hydrolase 587 788 IPR006379 -
Pral5280g00008 837 Pfam Trehalose-phosphatase 589 822 IPR003337 GO:0003824|GO:0005992
Pral5280g00008 837 FunFam alpha,alpha-trehalose-phosphate synthase [UDP-forming] 6 53 312 - -
Pral5280g00008 837 FunFam alpha,alpha-trehalose-phosphate synthase [UDP-forming] 6 585 702 - -
Pral5280g00008 837 Gene3D Glycogen Phosphorylase B; 53 312 - -
Pral5280g00008 837 FunFam Trehalose-6-phosphate synthase 2 669 748 - -
Pral5280g00008 837 CDD GT20_TPS 60 539 IPR001830 GO:0003824|GO:0005992
Pral5280g00008 837 SUPERFAMILY UDP-Glycosyltransferase/glycogen phosphorylase 60 543 - -
Pral5280g00008 837 Gene3D Glycogen Phosphorylase B; 313 523 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral5280g00008 Pral-Chr5280 83525 86799 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral5280g00008 1 837 Trehalose Biosynthesis Gene Families AT2G18700 67.929 0.0 1197
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral5280g00008 K16055 - qsa:O6P43_002917 1372.07