Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral5280g00003 ATGGCTCTTCTTTCTTCGATTTCTTCGTCCCCTCGTTCTCCTTCTCCTTTTCTATTCAACCATCTTCTGCATTCTCCTCCTCCTCCTCCTCCTTCTTGCTCCTTCATTTCCAGGCTTTGCTTCACTTCTTTCAATCTCAGCACCCAATTCTCTTCTTCACCCATCTCTGCAATGCCTCCTTCTTCCCCCAAAATCGATACCTCTTTGCTTACCCTCGACGAGTCTTTCTACGACGACGATCTCTGGGCCGCTTCCTCCCTCCGCGTCCGCTCCTTTCGCGAATTCCCCCCCGACACCTTCGGCCTCCAGGATCTTGTGAAGTGCTTGACTGAGCGCGAATTTGAAGCACTCAAGGAACGTGTTTCAGGGACAAGAGCAGGCCTTAGAAGAGTCTCTTGCATAAATGCTTCCCTTCCGGAATCGCTTGTATCAAGGATTTGCAGTGAATTATGCTCTGCATGTAAGTTTTCTGCCAATGGAGAAGACAGAATTGTAGTTGGTACACTTGATTTAAATCAGTGCCTCTGCCTACCTGATGAAATTTCAGGAACGAAGCCAGAGGTAATGGGATCTGATATCACAAGGGCATACCTCAGTAATGTCTGTGTTGCCAAAGAGTTGCAGAGAAATGGGTTGGGCTATGCTCTTCTTGAAAAGGCAAAGATGGTTGCTTATGATTGGGGCATAACAGATCTGTATGTACATGTTGCTGTGAACAACGAACCAGCTAGGAAATTGTATGTGAAGAGTGGGTTTGTATATGAAAGTGATGAACCAGCATGGCAAGCCAGGTTCCTTGATCGACCCCGAAGACTCCTCCTATGGACAGGTCTCTCAAGGGCCTAA 846 0.474 MALLSSISSSPRSPSPFLFNHLLHSPPPPPPSCSFISRLCFTSFNLSTQFSSSPISAMPPSSPKIDTSLLTLDESFYDDDLWAASSLRVRSFREFPPDTFGLQDLVKCLTEREFEALKERVSGTRAGLRRVSCINASLPESLVSRICSELCSACKFSANGEDRIVVGTLDLNQCLCLPDEISGTKPEVMGSDITRAYLSNVCVAKELQRNGLGYALLEKAKMVAYDWGITDLYVHVAVNNEPARKLYVKSGFVYESDEPAWQARFLDRPRRLLLWTGLSRA 281
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral5280g00003 281 Gene3D - 149 268 - -
Pral5280g00003 281 Pfam Acetyltransferase (GNAT) family 163 252 IPR000182 GO:0016747
Pral5280g00003 281 PANTHER OS08G0260000 PROTEIN 58 279 - -
Pral5280g00003 281 ProSiteProfiles Gcn5-related N-acetyltransferase (GNAT) domain profile. 104 271 IPR000182 GO:0016747
Pral5280g00003 281 FunFam uncharacterized protein LOC106768637 141 268 - -
Pral5280g00003 281 CDD NAT_SF 190 235 - -
Pral5280g00003 281 SUPERFAMILY Acyl-CoA N-acyltransferases (Nat) 190 262 IPR016181 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral5280g00003 Pral-Chr5280 29638 32542 Dispersed/Tandem
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR GNAT Pral5280g00003 Acetyltransf_1 3.3e-10 CL0257
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral5280g00003 - - ccaj:109811855 357.451