Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral5280g00002 ATGGCTCTTCTTTCTTCGATTTCTTCGTCCCCTCGTTCTCCTTCTCCTTTTCTATTCAACCATCTTCTGCATTCTCCTCCTCCTCCTCCTCCTTCTTGCTCCTTCATTTCCAGGCTTTGCTTCACTTCTTTCAATCTCAGCACCCAATTCTCTTCTTCACCCATCTCTGCAATGCCTCCTTCTTCCCCCAAAATCGATACCTCTTTGCTTACCCTCGACGAGTCTTTCTACGACGACGATCTCTGGGCCGCTTCCTCCCTCCGCGTCCGCTCCTTTCGCGAATTCCCCCCCGACACCTTCGGCCTCCAGGATCTTGTGAAGTGCTTGACTGAGCGCGAATTTGAAGCACTCAAGGAACGTGTTTCAGGGACAAGAGCAGGCCTTAGAAGAGTCTCTTGCATAAATGCTTCCCTTCCGGAATCGCTTGTATCAAGGATTTGCAGTGAATTATGCTCTGCATGTAAGGTAATGGGATCTGATATCACAAGGGCATACCTCAGTAATGTCTGTGTTGCCAAAGAGTTGCAGAGAAATGGGTTGGGCTATGCTCTTCTTGAAAAGGCAAAGATGGTTGCTTATGATTGGGGCATAACAGATCTGTATGTACATGTTGCTGTGAACAACGAACCAGCTAGGAAATTGTATGTGAAGAGTGGGTTTGTATATGAAAGTGATGAACCAGCATGGCAAGCCAGGTTCCTTGATCGACCCCGAAGACTCCTCCTATGGACAGGTCTCTCAAGGGCCTAA 750 0.4813 MALLSSISSSPRSPSPFLFNHLLHSPPPPPPSCSFISRLCFTSFNLSTQFSSSPISAMPPSSPKIDTSLLTLDESFYDDDLWAASSLRVRSFREFPPDTFGLQDLVKCLTEREFEALKERVSGTRAGLRRVSCINASLPESLVSRICSELCSACKVMGSDITRAYLSNVCVAKELQRNGLGYALLEKAKMVAYDWGITDLYVHVAVNNEPARKLYVKSGFVYESDEPAWQARFLDRPRRLLLWTGLSRA 249
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral5280g00002 249 CDD NAT_SF 151 203 - -
Pral5280g00002 249 Pfam Acetyltransferase (GNAT) family 160 220 IPR000182 GO:0016747
Pral5280g00002 249 PANTHER OS08G0260000 PROTEIN 58 157 - -
Pral5280g00002 249 SUPERFAMILY Acyl-CoA N-acyltransferases (Nat) 79 231 IPR016181 -
Pral5280g00002 249 ProSiteProfiles Gcn5-related N-acetyltransferase (GNAT) domain profile. 87 239 IPR000182 GO:0016747
Pral5280g00002 249 Gene3D - 139 236 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral5280g00002 Pral-Chr5280 29638 32542 Dispersed/Tandem
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR GNAT Pral5280g00002 Acetyltransf_1 7.3e-10 CL0257
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral5280g00002 - - ccaj:109811855 283.493