Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral5280g00001 ATGCGAAACCCCAGTTCTGTGAAGCGAGAATTCCTCCGGAAATGGATAAAGGGTCTTGGAAAATGCAGGTTGTTGAAGAACAACATGAGCTTCTTGGAGAGAAAGAAAGCCATAAAGCTGTCTGCAGATTTAGCCATGGCTTCCACCAGAAGCGGAGCCGCACGGTGGAGCCGAGCCCTTATCGCTGAAGCCTCCTCACCAGACGACGACGGCTACAACAAAATCCTCACGGAGCACATATTTGGCTCGCCGGAGAACCAGAGGCCGAAAGGGAAAGTTCAGAGTACGACGTCGTCGTCTAGCCTTTGCAGAAGCAGAGGGATCTTGAAACGCAGCCGTCTGGTGCGTAAAGTAGTGAAGAAGAAGAAGAAGAAGAAAATAGGGTCACCAAAGGTGATGGCGAATTGGATTGCGAAGAGGTTGGTGAAGAAGAGAACGAAAATGCTCAAGAGTCTGTTGCCAGGAGGAGAGTCCATGGATGACGACGTTGTTTTGATCGAAGAAACCCTAGATTATGTACAATATCTGAGAGCTCAAGTTGAAGTCATGCGATGTCTTGCCACCGCCTCTGAGCTCACCAGAAATTCGTAA 591 0.4907 MRNPSSVKREFLRKWIKGLGKCRLLKNNMSFLERKKAIKLSADLAMASTRSGAARWSRALIAEASSPDDDGYNKILTEHIFGSPENQRPKGKVQSTTSSSSLCRSRGILKRSRLVRKVVKKKKKKKIGSPKVMANWIAKRLVKKRTKMLKSLLPGGESMDDDVVLIEETLDYVQYLRAQVEVMRCLATASELTRNS 196
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral5280g00001 196 CDD bHLH_AtIBH1_like 139 187 IPR044549 GO:0006355
Pral5280g00001 196 PANTHER TRANSCRIPTION FACTOR IBH1-LIKE 1 6 189 IPR044660 GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral5280g00001 Pral-Chr5280 25944 27325 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral5280g00001 1 191 Basic Helix-Loop-Helix Transcription Factor Gene Family AT4G30410 40.838 1.86e-32 113
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral5280g00001 - - qsa:O6P43_002930 186.422