Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral527g00007 ATGGAAGAGAGGGAGGAAAAGAGGAAGACGAAGGCGAAGAAGGAAGGAAGGAAGGAAGACGGAATGGCGGATTGCGCGCTGTGCGGGAAGAGAGCGAGGATGTACTGTGAGTCGGACCAGGCTAAGCTATGCTGGCGCTGCGACGACAAGGTTCACGGCGCCAACTTTCTGGTGGCGAAGCACACCAGAGTTCTTCTCTGCCGTACCTGTCAGTCTTTCACTCCCTGGAAAGCCTGTGGTCCTAAGCTCACTCCGACTCACTCCATCTGTAACCACTGTGCCTCCGATTCCCACAAGCATCACCAGGAAGAAGATGATCGTGATGATCATCATCATGATCTCCGTGACAGTCCTGATCGTGAGGAGGAGGAGGAGCAGTATGATGCTGGAGATTCCAGTTCCGATGCTGACTCTGGTTATGAAGATGATGACGATGAAGACGAGGGAGAGGACGAGGAGGAGGAGGAGGAAGGAGAGAACCAGGTGGTTCCATGGTCTTGCGCTTCTGCTTCGGAGTCATCGCCGCCTCTTGCAAGTTCCGCTTCAGCTGGTTCTTCTTTGTCCTGGAAGCGGCGGCGATCGAGTGCGTTTGTCGATTCCGATGATGAGATCGGCTGTTCTTCATCTGAAATGCCCTCTGCCGCGCAACTACCAGACGATGATTCATCTTCTTGGAGCATCCTCAGGCCATGGAAGCATCCTAGAACTACTCCGCAGAGCTAA 723 0.5394 MEEREEKRKTKAKKEGRKEDGMADCALCGKRARMYCESDQAKLCWRCDDKVHGANFLVAKHTRVLLCRTCQSFTPWKACGPKLTPTHSICNHCASDSHKHHQEEDDRDDHHHDLRDSPDREEEEEQYDAGDSSSDADSGYEDDDDEDEGEDEEEEEEGENQVVPWSCASASESSPPLASSASAGSSLSWKRRRSSAFVDSDDEIGCSSSEMPSAAQLPDDDSSSWSILRPWKHPRTTPQS 240
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral527g00007 240 SMART bboxneu5 20 66 IPR000315 GO:0008270
Pral527g00007 240 MobiDBLite consensus disorder prediction 99 119 - -
Pral527g00007 240 PANTHER ZINC FINGER PROTEIN CONSTANS-LIKE 10 25 225 - -
Pral527g00007 240 Pfam B-box zinc finger 24 65 IPR000315 GO:0008270
Pral527g00007 240 ProSiteProfiles Zinc finger B-box type profile. 20 66 IPR000315 GO:0008270
Pral527g00007 240 MobiDBLite consensus disorder prediction 99 240 - -
Pral527g00007 240 MobiDBLite consensus disorder prediction 206 240 - -
Pral527g00007 240 MobiDBLite consensus disorder prediction 164 193 - -
Pral527g00007 240 CDD Bbox1_BBX-like 25 66 - -
Pral527g00007 240 MobiDBLite consensus disorder prediction 120 160 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral527g00007 Pral-Chr527 60573 61920 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral527g00007 25 210 C2C2-CO-like Transcription Factor Family AT4G27310 42.079 2.53e-34 121
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR Others Pral527g00007 zf-B_box 3.4e-07 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral527g00007 - - pcin:129314210 275.404