Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral527g00004 ATGATGGAGAGTTTCAGAGTGATGTATCTGTACTTCTTGCTGCTATGCTTTATAAAACCGCTCACTTCACAAGACAGCATCACTCCCGGAAACTTGATTAGAGAGGGCGAGACTTTAGTTTCCTCAAATGGGGATTTTGAATTTGGATTCTTCCGCCCTGGGTCTGCAAACGCCCGGTATTTAGGGATATGGTATAAGAAGTCTCCGTCTACAATCTTCTGGGTGGCCAACCGAGACAAACCTCTCAACAACGATAGGGGTAAGGGTGTCTTACGGTTAAATGATCGAGGAGTTCTCCTCCTTCTTGATGCCACAAACAACAACACCGTGTGGTACTCCAATCATTCATCAATCAGAGCATATAATACTTTTGCTCAACTCTTGGATTCGGGAAATCTCGTGGTGAAAAATGGATATGGTGGTGGTGACAGTGGTGACTTTGACCAACTCTTATGGCAGAGTTTTGACCACCCTTGTGACACCTTAATGCCGGGAATGAAGCTTGGGTGGGATGAAGAAACGGGTTTGGATAAATTTCTGTCATCTTGGAAAAGTTCAGATGATCCAGGTCAGGGAGACTACGTAATGAAACTAGACCGTAGAGGGTACCCACAAATCTTTCAACTGAGTGGTTCCAAGGTGATAGTTAGAGCAGGGTCATGGAATGGCGTCTCTTTCACGGGATATTCAAAACATAGTCCGGATCCAGTTGAAAAACTGGATGTGTTGAATGAAAAAGAGGCATATTACAAGAGTAGTCTTATAAATAATTCAATTTTCTCTAGATATATAATGACCCCTTCAGGCATAGGGCAGCGTTTTGATTGGGTAATTCAAACAAGCAGCTGGCGGGTGATGAACACTGCTCTTCCTGACTCGTGTGACAATTATGCATTATGTGGTGCAAATTCTATCTGCGACATCAGTAGCAATCCTGTTTGCGAATGCCTAAGAGAACCCAAGAATTTTAAGGAATGGAATGTGTCTGATTGGAACAGTGGCTGCACTAGAAGGGTTTCTTTGAATTGTGATGCTAGCGATGGATTTAAGCAGTATACAGGCGTTAAGCTGCCAGACACGTCATCTTCATGGTATAACATGACCATGGCCCTTGAGGAATGCAAGAGAACATGTCTGCAAAACTGTTCTTGTACAGCATATGCAAGTTTGGATGTTCGAGGTGAAGGAAGTGGCTGCTTGATATGGCTTGATCAACTAGTTGACATGAGACAATTTCTTGACGGTGGACAAGACCTCTATGTACGAGTTCCTGCTTCAGAGCTAGATCATTTTCGGGATGAAGGCCATGGAAGCATTGGCAAGAAGGAGATAGTGGCAATTGTGGTTGGCTGTGCAATATTCGTATCAAGTTTTATGATTTTTGGATTGACTTTAATTGCAAGGAAAAGGAGACTTCAAGATTCGGTGGAGGAGGGCATGGATCTTCCAACATTTGATTTGTCAGTCATAATGAAGGCCACTGATAATTTTTCTACCGTTAACAAATTGGGTGAAGGTGGCTTTGGGCCTGTATACAAGGGTATTCTAGAAGATGGCCAAGAATTAGCTGTGAAAAGGTTGTCCACAAAATCTGATCAGGGGTTGGAAGAGTTGAAAAATGAAGTTCTATTGATAGCAAAACTTCAACACCGTAATCTTGTGAAGCTTCTTGGTTGCTGCATTGAAGGAGAAGAAAAGTTGCTGATTTACGAGTATATGCCAAACAAGAGCTTGGATCACTTTATTTTTGATGAAAGTTGTAGCAACTTGTTGGACTGGCTTAAGCGTTGGCATATCATTCATGGCATTGCTCGAGGACTTGTATATCTTCATATAGATTCCAGATTAAGAATTATTCATAGAGATCTTAAAACCAGCAATATTCTTCTAGATGCTTACATGAATCCAAAAATATCTGACTTTGGCCTTGCTCGCATATTTTGGGATGATCAAGTGGTCGCCAATACTAACAAAGTTGTTGGAACATATGGATATATGCCTCTTGAATATGCTGTGCGTGGACAATTTTCAATGAAATCAGATGTCTTTAGCTTTGGTGTAATAGTACTAGAAATTATTAGTGGAAAGAAGAACAGAGAGTTTTCTCACCCTTATCTCAATCTTCTTGGACATGCATGGAGACTGTGGATCCAAGGAAGACCATTGGAGCTACTGGATGAATGTTTAAAGGAAAGTTGTAGTCAATTTGAAGTCGTAAGATGTGTACAGGTAGGACTATTATGTGTGCAACAAAGAGCTGAAGATAGGCCAGATATGTCAACTGTAATTCTTATGTTAAATGGTGAGAAATTGTTGCCACAACCAAAAGTTCCTGGTTTTTACACTGCAAGTGATGTCCTCGTTGGTTCAAGTTCATTACACCAAATATTCACACAGTTCTCACAAAATGAAATTTCTCAAACCATGCTAGACGGAAGGAATGAAGCTTGGATGGATCAAGAAACAGGTCTGGATATAACTCTGTCTTGGAAAAGCTCAGATGATCCAGGTCAAGGAGATTACAAAATCAAAATAGACCTTAAAGGATTTACAGTGACCCCATCAGGGATTGGGCAGCGTTTTGATTGGTTAATTAAAACAAGCAGCTGGCAGTTAATGAACCCTGCCCCCCTGGTCAATGTGCAAATTATGCCTTGTGTGGAGCAAATTCTATATGCAACATCAGCAACAGTCCTTTGTGAATGCCTGAGAGGTATGCGGGAGTCAAGTTGCCAGACGCCTCTTCTTCATGGTATAACAAGACCATGGTTCTTGGGGAATGAAGACGTGGATATTCCAACATTTGATCTGTCAATCATAGCTAAGGCTACTGATAATTTTTCTGCCACTAACAAATGGGGTGAAGGTGGCTTTGGGCCAATATACAAGGGTACTCTAGAAGACGGGCAAGAGTTATCTGTGAAAAGGTTATCAACAAAATCTGGTCAAAGGCCGGAAGAGTTGAAAAATGAAGTTGTGTTGATAGGCATGATGTGCAAAATAATGGAGAGTTTCAGAGTAATGTATCTGTTCTCCTTGCTGCTATGGTTTATAAAACCGCTCACTTCACGGGACAGCATCCCCCCAGGAAACTTGATTAGAGAGGGTGAGACTTTAGTTTCCTCAAACCGGGATTTTGAACTAGGATTCTTCACCCCTGGGTCTTCAAATGCTCGATACGTAGGGATATGGTATAAGAAGTCTCCTTCTACAATCTTCTGGGTGGCCAACCGAGACAATCCTCTCAGCAACGATAGGGGTAAGGGTGTTTTACGGTTAAATGATCGAGGAGTTCTTCTCCTCCTTGATGCCACGAACAACAACACAGTGTGGTCCTCCAATCATTCTTCAGCCAGACCATATTACCCTTTTGCTCAACTCTTGGATTCGGGAAATCTTGTGGTGAAAAATGGATATGGCAGTGGTAAGTTGGACCAAATCTTGTGGCAGAGTTTTGACCACCCTTGTGACACCTTAATGCCAGGAATGAAGCTTGGGTGGGATGAAGAAACGGGTTTGGATAAATTTCTGTCATCTTGGAAAAGCTCAGATGATCCGGGTCGGGGAGATTATGTGATCAGAATAAAGCGGAGAGGGTACCCACAAAGCTTTCTAATGAATGGTTCTAAGGCGATGGTCAGAGCAGGACCATGGAATGGCTTCACTTTCACGGGATTTTCAAGTCATTTTCTTAGTCCAGTAATAAATCCTGAGTTTGTGTTGAATGAAAAAGAGGCATATTACAAATTTGATCTTGTGAATAATTCAGTTTTCTGTAGATATATAGTGACCCCTTTAGGTATCGGGCAGAGTTTTGAGTGGGTAATTCAAACGAGCAGCTGGCGGGTGATGATCACTGGTGCCCCTGACCTGTGTGACAACTATGCCTTATGTGGTGCAAATACTATCTGCGACATCAATAACAATCCTCTTTGTGAATGCCTTAGAGGGTATGAACCCAAGAATTTTAAGGAATGGGATGTGTCTTATTGGAGCGGTGGCTGCACTAGAAGGGTTTCTTTGGATTGTGATGCCAGTGATGGATTTAAGCAGTATAAAGGCATCAAGTTGCCAGACACCTCTTCTTCGTGGTATAACAAGACCATGGCCCTTGAGCAATGTAAGAGAACATGTCTGCAAAACTGTTCTTGTACAGCATATTCAAATTTGGATATTCGAGGAAGTGGCTGCTTGATGTGGTTCGATGAACTATTTGACATGAGACAATTTCTTGAGGGCGGACAAGACCTCTATGTACGAGTTCCTGCTTCAGAGCTAGATCATTTTAAGGACGAAGGCCATGGGAGCATTGGCAAGAAGGGGCTAGTAGGAATTGCTGTTGGCTGTGCAATATTTGTAACGGGTTTCATGATACTTGGATTGACTTTATTTGCAAGGAAAAGAGAACTTTGTGATTCAGCGAAAGAAGTCTTGGATCTTCCAACATTTGATGTGTCAGTCATAGCTAAAGCTACTGATAATTTTTCTGACATTAACAAACTGGGTGAAGGTGGCTTTGGACCAGTATACAAGGGTATTCTACAAGATGGGCAAGAGCTAGCTGTAAAAAGGCTATCAACAAAATCTGGTCAAGGGCTAGAAGAGTTGAAAAATGAAGTCGTGTTAATAGCAAAACTTCAGCACCGTAATCTTGTGAAGCTTCTTGGTTGTTGCATTGAGGGGAAAGAGAAATTGTTGATTTATGAATATATGCCAAACAAGAGCTTAGACCACTTTATTTTTGATGAAGTTCGTAGCAAGTTGCTGGATTGGCTTAAGCGTTGGCATATTATTCATGGAATTGCTCGAGGACTTGTCTATCTTCATATAGATTCCAGATTAAGAATTATTCATAGAGACCTTAAAACTAGCAATATTTTGCTAGATACTTCTATGAATCCAAAAATATCTGACTTTGGCCTAGCTCGCACATTTTGGGATGATCAGGTTGAGGCCAACACTAACAAAATTGTTGGAACATATGGATATATACCTCCTGAATATGCCATGCATGGGCAATTTTCAACGAAATCCGATGTCTTTAGCTTTGGTGTGATAATTTTAGAAATTGTTAGTGGGAAGAAGAACAGAGGCTTTTCAAACCCAGAATACTACCTTAATCTTCTTGGACATGCATGGAGACTGTGGATCCAAGGAAGAACATTGGAGCTATTGGATGAATGTCTAAAGGAAAATTGCATTGAATGTGAAGTCATAAGATGTATACAAGTAGGACTATTATGTGTGCAACAAAGAGCTGAAGATAGGCCTGATATGTCAGTTGTAGTTCTAATGTTAAATGGTGAGAAATTGTTGCCACAGCCAAAAGCCCCTGGTTTTTACACTACGAGTGATGTTTCTCCTGATCCAACTTCTTTTGACCAAAGATGTACGCAATTCTCACAAAACGAAATTTCTCAAAGCATGCTGGGGGGAAGATGA 5442 0.4127 MMESFRVMYLYFLLLCFIKPLTSQDSITPGNLIREGETLVSSNGDFEFGFFRPGSANARYLGIWYKKSPSTIFWVANRDKPLNNDRGKGVLRLNDRGVLLLLDATNNNTVWYSNHSSIRAYNTFAQLLDSGNLVVKNGYGGGDSGDFDQLLWQSFDHPCDTLMPGMKLGWDEETGLDKFLSSWKSSDDPGQGDYVMKLDRRGYPQIFQLSGSKVIVRAGSWNGVSFTGYSKHSPDPVEKLDXVLNEKEAYYKSSLINNSIFSRYIMTPSGIGQRFDWVIQTSSWRVMNTALPDSCDNYALCGANSICDISSNPVCECLRGXPKNFKEWNVSDWNSGCTRRVSLNCDASDGFKQYTGVKLPDTSSSWYNMTMALEECKRTCLQNCSCTAYASLDVRGEGSGCLIWLDQLVDMRQFLDGGQDLYVRVPASELDHFRDEGHGSIGKKEIVAIVVGCAIFVSSFMIFGLTLIARKRRLQDSVEEGMDLPTFDLSVIMKATDNFSTVNKLGEGGFGPVYKGILEDGQELAVKRLSTKSDQGLEELKNEVLLIAKLQHRNLVKLLGCCIEGEEKLLIYEYMPNKSLDHFIFDESCSNLLDWLKRWHIIHGIARGLVYLHIDSRLRIIHRDLKTSNILLDAYMNPKISDFGLARIFWDDQVVANTNKVVGTYGYMPLEYAVRGQFSMKSDVFSFGVIVLEIISGKKNREFSHPYLNLLGHAWRLWIQGRPLELLDECLKESCSQFEVVRCVQVGLLCVQQRAEDRPDMSTVILMLNGEKLLPQPKVPGFYTASDVLVGSSSLHQIFTQFSQNEISQTMLDGRNEAWMDQETGLDITLSWKSSDDPGQGDYKIKIDLKGFTVTPSGIGQRFDWLIKTSSWQLMNPAPLVNVQIMPCVEQILYATSATVLCECLRGMRESSCQTPLLHGITRPWFLGNEDVDIPTFDLSIIAKATDNFSATNKWGEGGFGPIYKGTLEDGQELSVKRLSTKSGQRPEELKNEVVLIGMMCKIMESFRVMYLFSLLLWFIKPLTSRDSIPPGNLIREGETLVSSNRDFELGFFTPGSSNARYVGIWYKKSPSTIFWVANRDNPLSNDRGKGVLRLNDRGVLLLLDATNNNTVWSSNHSSARPYYPFAQLLDSGNLVVKNGYGSGKLDQILWQSFDHPCDTLMPGMKLGWDEETGLDKFLSSWKSSDDPGRGDYVIRIKRRGYPQSFLMNGSKAMVRAGPWNGFTFTGFSSHFLSPVINPEFVLNEKEAYYKFDLVNNSVFCRYIVTPLGIGQSFEWVIQTSSWRVMITGAPDLCDNYALCGANTICDINNNPLCECLRGYEPKNFKEWDVSYWSGGCTRRVSLDCDASDGFKQYKGIKLPDTSSSWYNKTMALEQCKRTCLQNCSCTAYSNLDIRGXSGCLMWFDELFDMRQFLEGGQDLYVRVPASELDHFKDEGHGSIGKKGLVGIAVGCAIFVTGFMILGLTLFARKRELCDSAKEVLDLPTFDVSVIAKATDNFSDINKLGEGGFGPVYKGILQDGQELAVKRLSTKSGQGLEELKNEVVLIAKLQHRNLVKLLGCCIEGKEKLLIYEYMPNKSLDHFIFDEVRSKLLDWLKRWHIIHGIARGLVYLHIDSRLRIIHRDLKTSNILLDTSMNPKISDFGLARTFWDDQVEANTNKIVGTYGYIPPEYAMHGQFSTKSDVFSFGVIILEIVSGKKNRGFSNPEYYLNLLGHAWRLWIQGRTLELLDECLKENCIECEVIRCIQVGLLCVQQRAEDRPDMSVVVLMLNGEKLLPQPKAPGFYTTSDVSPDPTSFDQRCTQFSQNEISQSMLGGR 1816
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral527g00004 1816 ProSitePatterns Serine/Threonine protein kinases active-site signature. 1619 1631 IPR008271 GO:0004672|GO:0006468
Pral527g00004 1816 FunFam Os04g0303100 protein 1066 1214 - -
Pral527g00004 1816 SUPERFAMILY Protein kinase-like (PK-like) 1480 1769 IPR011009 -
Pral527g00004 1816 CDD PAN_AP_plant 1341 1425 - -
Pral527g00004 1816 Pfam PAN-like domain 345 411 IPR003609 -
Pral527g00004 1816 Pfam PAN-like domain 1345 1410 IPR003609 -
Pral527g00004 1816 PANTHER BULB-TYPE LECTIN DOMAIN-CONTAINING PROTEIN 10 758 - -
Pral527g00004 1816 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase At4g03230 466 574 - -
Pral527g00004 1816 SUPERFAMILY alpha-D-mannose-specific plant lectins 72 189 IPR036426 -
Pral527g00004 1816 ProSiteProfiles PAN/Apple domain profile. 345 426 IPR003609 -
Pral527g00004 1816 CDD STKc_IRAK 505 770 - -
Pral527g00004 1816 SUPERFAMILY alpha-D-mannose-specific plant lectins 1074 1188 IPR036426 -
Pral527g00004 1816 Gene3D Phosphorylase Kinase; domain 1 927 1003 - -
Pral527g00004 1816 CDD PAN_AP_plant 341 426 - -
Pral527g00004 1816 ProSiteProfiles Bulb-type lectin domain profile. 1026 1150 IPR001480 -
Pral527g00004 1816 CDD B_lectin 1033 1157 IPR001480 -
Pral527g00004 1816 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase 20 155 - -
Pral527g00004 1816 ProSiteProfiles PAN/Apple domain profile. 1345 1425 IPR003609 -
Pral527g00004 1816 Pfam D-mannose binding lectin 71 184 IPR001480 -
Pral527g00004 1816 Pfam D-mannose binding lectin 1073 1183 IPR001480 -
Pral527g00004 1816 ProSiteProfiles Protein kinase domain profile. 1498 1775 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pral527g00004 1816 SUPERFAMILY Protein kinase-like (PK-like) 479 768 IPR011009 -
Pral527g00004 1816 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase 1022 1154 - -
Pral527g00004 1816 Gene3D Phosphorylase Kinase; domain 1 465 574 - -
Pral527g00004 1816 Gene3D Phosphorylase Kinase; domain 1 1466 1573 - -
Pral527g00004 1816 Gene3D - 1022 1154 IPR036426 -
Pral527g00004 1816 Gene3D - 19 155 IPR036426 -
Pral527g00004 1816 SMART blect_4 1032 1157 IPR001480 -
Pral527g00004 1816 SMART blect_4 30 158 IPR001480 -
Pral527g00004 1816 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase At4g03230 1465 1573 - -
Pral527g00004 1816 Pfam S-locus glycoprotein domain 1216 1324 IPR000858 GO:0048544
Pral527g00004 1816 Pfam S-locus glycoprotein domain 217 321 IPR000858 GO:0048544
Pral527g00004 1816 CDD B_lectin 31 158 IPR001480 -
Pral527g00004 1816 SMART ntp_6 1346 1424 IPR003609 -
Pral527g00004 1816 SMART ntp_6 346 425 IPR003609 -
Pral527g00004 1816 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase 344 425 - -
Pral527g00004 1816 ProSiteProfiles Protein kinase domain profile. 499 774 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pral527g00004 1816 ProSiteProfiles Bulb-type lectin domain profile. 24 148 IPR001480 -
Pral527g00004 1816 SMART serkin_6 1498 1745 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pral527g00004 1816 SMART serkin_6 499 768 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pral527g00004 1816 Gene3D Transferase(Phosphotransferase) domain 1 1574 1776 - -
Pral527g00004 1816 Gene3D Transferase(Phosphotransferase) domain 1 575 774 - -
Pral527g00004 1816 Gene3D Hepatocyte Growth Factor 1342 1422 - -
Pral527g00004 1816 Gene3D Hepatocyte Growth Factor 342 423 - -
Pral527g00004 1816 SUPERFAMILY Protein kinase-like (PK-like) 934 1000 IPR011009 -
Pral527g00004 1816 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase 1574 1777 - -
Pral527g00004 1816 CDD STKc_IRAK 1504 1771 - -
Pral527g00004 1816 Pfam Protein tyrosine and serine/threonine kinase 501 765 IPR001245 GO:0004672|GO:0006468
Pral527g00004 1816 Pfam Protein tyrosine and serine/threonine kinase 1502 1765 IPR001245 GO:0004672|GO:0006468
Pral527g00004 1816 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase 1344 1424 - -
Pral527g00004 1816 ProSitePatterns Serine/Threonine protein kinases active-site signature. 620 632 IPR008271 GO:0004672|GO:0006468
Pral527g00004 1816 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase 575 776 - -
Pral527g00004 1816 FunFam Os04g0303100 protein 65 215 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral527g00004 Pral-Chr527 19341 34734 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral527g00004 462 783 Receptor kinase-like Gene Family AT4G23140 54.118 5.14e-111 368
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Pral527g00004 PK_Tyr_Ser-Thr 2.6e-44 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral527g00004 - - pcin:129299332 964.14