Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral5273g00006 ATGGAAATCAAAGTGACTTCAAGAGAAATCATCAAGCCATCCAAACCCACTTCTCCAGAAAACAAAACCTTCAAGCTTTGTTCCTTCGACATCCTCCACCGTAACACTTACATCCCTGTAATCTTATTCTACCCCACCTTCACAAACCCCAATAACATTCTCAAACACTCGCTTTCGGAAACCCTAACCATCTTCTACCCTCTCGCCGGCCGACGAAACGACCTCGTTTCCGTCTCCTGCAACGACGAAGGAGCCGTCTATTATGAAGCCACCGTGAACACTTCCATCTCCGACTTCCTGAACCCACCAAAAACAGAATATCTAAACCAGCTTCTTCCATGCGAGCCGTGCAAGATTCATCCACCGGGATCGTTGCCTCATTTGCTGGTTCAAGTTAACACTTTCGAGTGTGGCGGTGTGGCCATTGGGGTGTGTAATCTTCATACCATCATGGATGCTTGCTCGTGCCGTGTCTTGTTGAAGACTTGGTCGGCGATTTGTCGGAATAAAAGAGAAGACATCGAGTGGCCGGATTTTGATTCTGCATTTGCCGTGTTCCCTCCCATAGATTTTTCCCGTGTGCGTGCCGGCCTTGTTTCTTCTTCCTCAAAAGTTGAAGCCAATTGCACCATAAGAAGGTGA 642 0.4766 MEIKVTSREIIKPSKPTSPENKTFKLCSFDILHRNTYIPVILFYPTFTNPNNILKHSLSETLTIFYPLAGRRNDLVSVSCNDEGAVYYEATVNTSISDFLNPPKTEYLNQLLPCEPCKIHPPGSLPHLLVQVNTFECGGVAIGVCNLHTIMDACSCRVLLKTWSAICRNKREDIEWPDFDSAFAVFPPIDFSRVRAGLVSSSSKVEANCTIRR 213
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral5273g00006 213 PANTHER F21J9.9 4 210 - -
Pral5273g00006 213 Gene3D - 1 195 IPR023213 -
Pral5273g00006 213 Pfam Transferase family 1 182 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral5273g00006 Pral-Chr5273 54155 54796 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral5273g00006 1 169 Monolignol Biosynthesis Gene Families AT5G48930 31.667 6.07e-18 79.7
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral5273g00006 - K13065 pcin:129321515 345.51