Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral5273g00003 ATGATGATGAAGTTGAAGACCAAACTGTTGAGAAGAGAACTTGGTGCATTATTGAGAAAGAAGGTAAGTATTGGTAGAGTTGTGAAATGGGTTAGGTTTTGCTGTTGCTTTGATGAAGAGGGAAACATACCAAAAGATGTTCCAAGAGGTCACGTAGCTGTGTATGTGGGAGAAGATTGCAAGAGATATGTGATTAGGGTTTCTGTGGTGAACCATCCACTGTTCAAGACATTGCTTGATCATGCCGAGGATGTTTTTGGATTCAGCAATGCCTCTAAACTCCATATTCCTTGCAGTGAGAGGATTTTTCTAAACATCCTTCATAATGCTGCTCTTCTTCAACCTTAA 348 0.3994 MMMKLKTKLLRRELGALLRKKVSIGRVVKWVRFCCCFDEEGNIPKDVPRGHVAVYVGEDCKRYVIRVSVVNHPLFKTLLDHAEDVFGFSNASKLHIPCSERIFLNILHNAALLQP 115
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral5273g00003 115 Pfam Auxin responsive protein 29 107 IPR003676 GO:0009733
Pral5273g00003 115 PANTHER AUXIN-INDUCED PROTEIN-LIKE-RELATED 24 105 IPR003676 GO:0009733
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral5273g00003 Pral-Chr5273 16481 16828 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral5273g00003 18 107 Calmodulin-binding Proteins AT4G34750 40.206 2.34e-19 76.3
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral5273g00003 K14488 - adu:107467907 111.694