Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral5271g00003 ATGGAATTGCCTGATTTTTCTATGGCACATAAGCTTGAAAACGTAGATCTCTGTGATTGTTCAAGTTTGAGGAGTGTTCATCCATCCATTTTATCTCTCCACACTCTTGTTAAATTGGATGTAGATCATTGCCATGAATTAGAGAGTCTTGAAAGTGAGACTCATTTAGAATCCCTCTCCGATCTCCAAGCTAGCGGATGTGGCCTCAAGAAATTTTGTTTGTCATCAAATAAATTGGAAACCATATATCTTCGAGAAACTAGACTTGAAATATTGGATTTGCCAATCGGACGTTTCACAAAGCTTAGAAGTCTTTTAATTCTTCACGGTGAAAGATTGAGGAGTCTTCCAATAAAGGAGCTGTGTTGCTTGACAAATCTTACGGAGTTTCAGGTTCTTGATTTCAAGCAGGAAATTCACACAGAGGAGCTGCGCTCCCTTTTTTATGCTTGGCGTAATTTAGAAATACTATGTTTGGACGGATGGAGTTACTTGTCGGAAATCCCTGGCAATATCAAGTGCTTAACAAGGTTACAAAATTTATCATTGCAACGTAGTGGTGTAGAGACATTGCCACCTTGCGTCAGCCATCTTTCAAGCTTGACAGGCATTTACCTATTTGGCTGCAAAAGGCTTAAGTCGATACTTGGACTTCCTCCCATGCTTAAAGCATTAGATGCCAATGATTGCACTTTATTGGAGACTGTATCCTCTGACTCTCTAGTTTTCAGTCCGTGTTGGTTTCAATTCAAAAACTGTGTAAAGTTGGATGAGTGTTCGCTTGGCTTTATTGAGGAATCAACTCATTTCTCACTGACTTCAGCTTGTGGGACTGCATTTAATTACCTTGATTTAGCTCGTTACCCAGGAAACAGAGTTCCAAAGTGGATGAAATATAAACAAATGACAGAGGCTTCCAATACTATCCAATTCATGACAGAGGCTTCCAATACTATCCAATTCACTTGCAATCTTGAACGAGCAATTGGCATATTGTTTTGTTGTGTTGCTCCTCATCGTCATCTCAGATCACTGGGACAGCGCCCTCTCGTCACCTACCATGTATTTATATGGCCCAGGAAGGGGTTCCCATTTGGTACTAGAACAGGTGATGATGTTAAGATTTCATGTGAATTCTTTCTGGAATGGCGGGATCATGGAAAGATGTATTGCAACCACAAAGTCCCTCTTGAAGCATGTGGAGTACACGTAATATATGACTCGGAGTCAGAGCCTGGGTCGGGTCAAAAAAGAAAGAGGGTTGCTGATATAGGTGTTGAAGATGGAGTCCCTCCCACAAAGCGGCTCAACAATTCTTGGATCTCTCAACCTGCTCCCCTGGGACTGGCATTGCAGTTGGGGTTGGCTACTACTAAATCCAACAAATCTCATGATAACTTCATCTGTCACCCACTGCAACTCAAATTTATGCGCAAGAAGAAACAAGAGGACCCTTTGCAGCTCAAGTTAAATATAAATTCTGACAG 1487 0.4136 MELPDFSMAHKLENVDLCDCSSLRSVHPSILSLHTLVKLDVDHCHELESLESETHLESLSDLQASGCGLKKFCLSSNKLETIYLRETRLEILDLPIGRFTKLRSLLILHGERLRSLPIKELCCLTNLTEFQVLDFKQEIHTEELRSLFYAWRNLEILCLDGWSYLSEIPGNIKCLTRLQNLSLQRSGVETLPPCVSHLSSLTGIYLFGCKRLKSILGLPPMLKALDANDCTLLETVSSDSLVFSPCWFQFKNCVKLDECSLGFIEESTHFSLTSACGTAFNYLDLARYPGNRVPKWMKYKQMTEASNTIQFMTEASNTIQFTCNLERAIGILFCCVAPHRHLRSLGQRPLVTYHVFIWPRKGFPFGTRTGDDVKISCEFFLEWRDHGKMYCNHKVPLEACGVHVIYDSESEPGSGQKRKRVADIGVEDGVPPTKRLNNSWISQPAPLGLALQLGLATTKSNKSHDNFICHPLQLKFMRKKKQEDPLQLKLNINSD 495
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral5271g00003 495 PANTHER LEUCINE-RICH REPEAT-CONTAINING 69 316 - -
Pral5271g00003 495 Gene3D Ribonuclease Inhibitor 1 72 IPR032675 -
Pral5271g00003 495 SUPERFAMILY L domain-like 3 246 - -
Pral5271g00003 495 Gene3D Ribonuclease Inhibitor 73 275 IPR032675 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral5271g00003 Pral-Chr5271 36460 38020 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral5271g00003 2 238 WRKY Transcription Factor Family AT4G12020 27.311 9.38e-11 62.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral5271g00003 - - pcin:129287862 408.297