Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral5271g00002 ATGGCATCTTCTGCTTCTTCTTCCCAAGTTCCTTGTGGCAAACATGATGTTTTTATCAGCTTTAGAGGACCAGACATCAGATCTGATTTTCTCAGCCATTTGAAAAGGGCATTGCGTCAAAAGAACGTAGATGTCTATGTTGATGATAGGCTCGAGAGAGGAGAAGAAATATGGTCAGCACTTGTGAATGCAATAGAAGGATCCATGATTGCTTTGGTTATATTCTCCGACAATTATGCTTCTTCAGAGTGGTGCTTGGAAGAGCTAGTGAAAATCGTGGAATGTAAAAAAGCTAATCAACAGATTGTGATACCAATATTTTACCGTGTGGATCCATCACATGTCAGGCATCAAACACACACTTATGCAGAAGCATTTACTCATCATGAGCAAAGGTTCCCGGACAACATGGACAATTTGGAAAATTGGAGATCTGTTTTGAAAGAAACTGCTCACTTATCCGGTTATCATTCATCAAATTTTCAAGATGAATCTGAACTCATCAATGCAATAGTTGAAGATGTCTTTAAAAAATTAGAAGTTAACACTCAAATTGTGCCAAGATCTCAGCTCATTGGATTTCATCAAAATTTCACTAATGTTGAATCATTAATGAAAATTGAGTCACCAGAAGTTCGAGTTCTCGGAATTTGGGGCCCAGGAGGGATAGGCAAAACAACCCTTGCTTCTGCTATATTTGACAACTTCTTGTCTAAATTTGAAAGTCACTGTTTCTTAGAAAATGTGAGAGAAGAATCAACAAAGATTGGGTTAAGCTCTTTGCGTCAAAAACTTCTTTCCAAGCTATTAGATCAAAAAGATTACATAAATATGAATCACACAATGAGAAGGTTGAAACAAAAAAAAGTGCTAATTGTAATTGATGATGTAGACAATCCAAAGCAACTAAAAGATTTGGCTGGACAACAACTTCACTTGGGACAGGGAAGCAGAGTCATTGTAACAAGTAGAGACAAGCATGTTCTTAGAAGTGGAGGGATTCATGAAAAATATATACATGAAGTCAGAGAATTGAGTAGAAAAGAATCACTTGAACTTTTCAGTATGCATGCCTTCAATCAAAATCATCCTATTCAAGGATATGAAGAGCTATCAAATTTGACAGCTGCCTTGGTTGGAGGCATTCCTTTAGCTTTAGAAGTTCTGGGTTCCCATTTTCATTCTAGGGATGAAGCATATTGGAAAAGTGAGCTTAGCAAACTCCAAAAGTATCCCCATCAGGATATTCAAAATATATTGAAGAGCAGTTAG 1272 0.3695 MASSASSSQVPCGKHDVFISFRGPDIRSDFLSHLKRALRQKNVDVYVDDRLERGEEIWSALVNAIEGSMIALVIFSDNYASSEWCLEELVKIVECKKANQQIVIPIFYRVDPSHVRHQTHTYAEAFTHHEQRFPDNMDNLENWRSVLKETAHLSGYHSSNFQDESELINAIVEDVFKKLEVNTQIVPRSQLIGFHQNFTNVESLMKIESPEVRVLGIWGPGGIGKTTLASAIFDNFLSKFESHCFLENVREESTKIGLSSLRQKLLSKLLDQKDYINMNHTMRRLKQKKVLIVIDDVDNPKQLKDLAGQQLHLGQGSRVIVTSRDKHVLRSGGIHEKYIHEVRELSRKESLELFSMHAFNQNHPIQGYEELSNLTAALVGGIPLALEVLGSHFHSRDEAYWKSELSKLQKYPHQDIQNILKSS 423
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral5271g00002 423 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 15 421 IPR044974 GO:0006952
Pral5271g00002 423 ProSiteProfiles TIR domain profile. 13 179 IPR000157 GO:0007165
Pral5271g00002 423 Pfam NB-ARC domain 202 416 IPR002182 GO:0043531
Pral5271g00002 423 Pfam TIR domain 14 184 IPR000157 GO:0007165
Pral5271g00002 423 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 174 423 IPR027417 -
Pral5271g00002 423 SUPERFAMILY Toll/Interleukin receptor TIR domain 5 156 IPR035897 -
Pral5271g00002 423 Gene3D - 178 339 IPR027417 -
Pral5271g00002 423 FunFam Disease resistance protein (TIR-NBS-LRR class) 12 181 - -
Pral5271g00002 423 SMART till_3 14 153 IPR000157 GO:0007165
Pral5271g00002 423 PRINTS Disease resistance protein signature 214 229 - -
Pral5271g00002 423 PRINTS Disease resistance protein signature 284 298 - -
Pral5271g00002 423 PRINTS Disease resistance protein signature 379 393 - -
Pral5271g00002 423 Gene3D - 344 423 IPR042197 -
Pral5271g00002 423 Gene3D - 12 177 IPR035897 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral5271g00002 Pral-Chr5271 34158 35719 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral5271g00002 15 391 WRKY Transcription Factor Family AT4G12020 28.646 2.04e-39 149
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral5271g00002 - - pcin:129287860 560.836