LGRPv2

Gene search

Sequence information

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Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Pral526g00015	ATGGCTACTGCCCATATTTACGTCGTACAGGGTTGCGATGCATCGTTACTGATAAACTCCACTGAGGCGGAGAAAGACGCTGGTGCAAGAGTACGAGGATTTGATTTCATCGACAAGGTGAAGGAAAGGCTTGAAGCAGCGTGCCCTTCCACGGTGTCATGTGCTGATATCATAACACTAGCCACCAGAGACGCCGTGGCTCTGGCCGGAGGACCCAAATATGAGGTTCACACCGGGCGACGTGACGGGCTCGTCTCTAGAAGCAGGGAGGTTGCTTTGTCAGGACCAGGTATCTCAGTGCAGAATCTTGGATTTCTTTGCCAGGAAGGGAATCGGACGACAAGACATGGTGAGCCTTATGGGTGGACACACGGTGGGAAAGGCGTTTGTATTGTCACTGCCGTTGCATCTGACACTGCTCAGTTTCAGCAAAGCTTCGCTGATGCAATGGTCAAGATGGGTAGAATTCAAGTTCTGGTTGGTAATGCTGGAGAAATTCGTAAGAAATGTAGTGCTTTAAACAATTAA	528	0.4962	MATAHIYVVQGCDASLLINSTEAEKDAGARVRGFDFIDKVKERLEAACPSTVSCADIITLATRDAVALAGGPKYEVHTGRRDGLVSRSREVALSGPGISVQNLGFLCQEGNRTTRHGEPYGWTHGGKGVCIVTAVASDTAQFQQSFADAMVKMGRIQVLVGNAGEIRKKCSALNN	175

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Annotation information

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Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Pral526g00015	175	PRINTS	Plant peroxidase signature	70	85	IPR000823	GO:0004601\|GO:0006979\|GO:0020037
	Pral526g00015	175	PRINTS	Plant peroxidase signature	51	61	IPR000823	GO:0004601\|GO:0006979\|GO:0020037
	Pral526g00015	175	PRINTS	Plant peroxidase signature	32	45	IPR000823	GO:0004601\|GO:0006979\|GO:0020037
	Pral526g00015	175	Gene3D	-	154	174	-	-
	Pral526g00015	175	Pfam	Peroxidase	7	102	IPR002016	GO:0004601\|GO:0006979\|GO:0020037
	Pral526g00015	175	ProSiteProfiles	Plant heme peroxidase family profile.	111	174	IPR002016	GO:0004601\|GO:0006979\|GO:0020037
	Pral526g00015	175	ProSiteProfiles	Plant heme peroxidase family profile.	5	103	IPR002016	GO:0004601\|GO:0006979\|GO:0020037
	Pral526g00015	175	PRINTS	Haem peroxidase superfamily signature	52	69	IPR002016	GO:0004601\|GO:0006979\|GO:0020037
	Pral526g00015	175	PRINTS	Haem peroxidase superfamily signature	70	82	IPR002016	GO:0004601\|GO:0006979\|GO:0020037
	Pral526g00015	175	PANTHER	-	131	174	IPR000823	GO:0004601\|GO:0006979\|GO:0020037

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Duplication type information

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Select	Gene	Chromosome	Start	End	Duplicated_type
	Pral526g00015	Pral-Chr526	233717	236112	Dispersed/Transposed

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Functional genes information

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Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Pral526g00015	131	174	Peroxidase	AT5G17820	47.727	1.63e-06	45.1

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Pathway information

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Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Pral526g00015	K00430		-	jre:108985677	130.183

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