Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral5265g00068 ATGGAGGATATGGAGATTGATCAAATTGTGGATGTTCCTGACACCCCTGAGAGATTAACTAATAGGCATTTTGGTCGAAAATATGCTGGTAATCCTGATGTTTGTGTGAATGAGAAGGGAGAGAGGGCTCCCCCTGTTGCTGAAAACAGTAAGAACGGAAGATTGGCTTTTTGTCTTTCAAAGAGCTCAAACAGTGGTGAAATGAATAACTGCATAGCTGCATCCCCATCAAATAATTCTTGTGCTTCTCAAAATGCTCCCATATTTAGGAGGTCCCAAGCTGACAAATCTTTTAGTAAAGAGTTCGCATATACAGCTGGATCTGAGAAGATGGAGAAAGGGAAAAATATATGCCTTAAATTTCCTTCTAACTCATCTTCCGGTGGTGATGGGGGTGTTACTGTCTTTGATTTGACTGAAGAAAATGGACAGCCCCAAAAACTCAAACCATTTTTCTCACGTCAAGGATTGAACGATAATGCAACTGAAACTAAGAAAGACGGGAAAGCAAACACTGGGAAATCTCCTATATCTTGCATCCCTGATTCTTCAAATATATCTAGCAATGTCTTAAGAGGAAAGTGTAAAATAGATGATAAAACAAATCCATGCTCAAATGTAACTGTTGATCGTGGAAAGAGTATTGATCTGTCTAGTGATTCTCATCAAAAAACTGAAAAGCAGGTGTCTTTGTCTCCTCGCCTTATAACCGCCCCAAGATTCAGAGGGCAGAAGAGATTGGTGCGAAATGGCTGTATCTCACCTTATAATATTGCAGCTAGAGCAAAACAATCTGCTGAACAGAATGATGTTGAACAGGGCCATGTGGTGGATGATGTTTCTGGCAACACAACTTCTCATGCGAGTATCAATGATATAGTTGCTGAAGAGAGAAGCAGTAACAGAGTGAAGGGAAAAGGATTATTTATCCATCCTTCAAGTGTGCATGATGCCAGAACTATCAACACAGCCAGCAGCAGCCCTATGGATAATCATGAAGAGGCCAGTGGTACCAGTAATGCCATCAGAAATTCGCATGAAAGCTTTGGGGATCAGGGTTTGACAATGACACGTAACTGCAGAACTACTCATTGGCCCTTGCATGATGTAACTGGGCATCGTTCAAGGAGAGGTGTAGATTCTGAAAGATTTATTACGACACAATGTAGGAACAGAGTGGGTAGAAGAGAAACTGGGAGCAGTCAAAACACTATGGATAGGTATCCTCTAGAAAATCATGCAACTTCTTTGATCATTCCTGATGCTGAACAGTCAACTAGACCTTGTAATACAGCAGACAAACTGACTAAAAGGCAAAGGAAAAATGCATCATCTTCTAGAAATCTTAATCCAGAGATTATGATTCTTGATTCGCCTGGGGAATCATCAACTATAAGCTCACCTCAAAGTCCTGAAGTTGTCGAGGTGTTACCTGGATCAACACACATCAACAGAGCATCCCATGATTCAGATGACATGAATCCTATTGATTCAGATACTCGGGCTAGACAGGTAGAAGCAGATGAGATATTGGCCCGTGAACTTCAAGAACAACTATATCATGAGGATTCTTTTGATGGGGGAGAGGATATTGATGAACATTTTGCATGGACATTGCAACATGAGGAGGAGCTTCTGCATACATCTCTTGAGAGTCACCATATATCACACCCTAGATGGTTGTCAAGGGCAACCTCAAATAGACAGCCTCGTTCCCGGTCTCACCAAAGTCCTTCAAATAGAAGGAGAGCCGTTCCTCATGTCCCTCCCTCTAGTAGAGTGTCACAGTTGAGGAGTCGCATTTTAAACCGGTCTTCAGTACCTGCCACTGCAACCAGAGGAAGACGTCTCCGGTTTCCTGTGGATATGGACTTTGACATGAGACTTGATATCTTGGAAGCATTGGAGGATGCAGTTGGAGATATTAGTGATATGGGAATTGCTGAAGACATATTTCAAGCTCACCGAGACTTCAATGAAAATGACTATGAAATGCTGTTGGCCCTTGATGAGAATAATCACCAACATGCTGGTGCATCTGTCCATCAGATCAATAGTTTGCCGCAGTCCACTATACAGACTGACAATTTCCAAGAGTCGTGCGCCATATGTCTTGAGATTCCAGTTACGGGAGAAGTGATTCGTCATCTTCCTTGTTTGCACAAATTTCACAAAGATTGTATTGATCCTTGGCTCCGTAGAAGGACCTCGTGCCCAGTGTGCAAGTCATCAATCATCTAA 2241 0.4217 MEDMEIDQIVDVPDTPERLTNRHFGRKYAGNPDVCVNEKGERAPPVAENSKNGRLAFCLSKSSNSGEMNNCIAASPSNNSCASQNAPIFRRSQADKSFSKEFAYTAGSEKMEKGKNICLKFPSNSSSGGDGGVTVFDLTEENGQPQKLKPFFSRQGLNDNATETKKDGKANTGKSPISCIPDSSNISSNVLRGKCKIDDKTNPCSNVTVDRGKSIDLSSDSHQKTEKQVSLSPRLITAPRFRGQKRLVRNGCISPYNIAARAKQSAEQNDVEQGHVVDDVSGNTTSHASINDIVAEERSSNRVKGKGLFIHPSSVHDARTINTASSSPMDNHEEASGTSNAIRNSHESFGDQGLTMTRNCRTTHWPLHDVTGHRSRRGVDSERFITTQCRNRVGRRETGSSQNTMDRYPLENHATSLIIPDAEQSTRPCNTADKLTKRQRKNASSSRNLNPEIMILDSPGESSTISSPQSPEVVEVLPGSTHINRASHDSDDMNPIDSDTRARQVEADEILARELQEQLYHEDSFDGGEDIDEHFAWTLQHEEELLHTSLESHHISHPRWLSRATSNRQPRSRSHQSPSNRRRAVPHVPPSSRVSQLRSRILNRSSVPATATRGRRLRFPVDMDFDMRLDILEALEDAVGDISDMGIAEDIFQAHRDFNENDYEMLLALDENNHQHAGASVHQINSLPQSTIQTDNFQESCAICLEIPVTGEVIRHLPCLHKFHKDCIDPWLRRRTSCPVCKSSII 746
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral5265g00068 746 SUPERFAMILY RING/U-box 690 745 - -
Pral5265g00068 746 SMART ring_2 701 741 IPR001841 -
Pral5265g00068 746 MobiDBLite consensus disorder prediction 442 472 - -
Pral5265g00068 746 MobiDBLite consensus disorder prediction 146 181 - -
Pral5265g00068 746 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 667 746 IPR013083 -
Pral5265g00068 746 MobiDBLite consensus disorder prediction 557 595 - -
Pral5265g00068 746 PANTHER SI:CH211-59O9.10 420 745 - -
Pral5265g00068 746 Pfam Ring finger domain 700 742 IPR001841 -
Pral5265g00068 746 MobiDBLite consensus disorder prediction 421 472 - -
Pral5265g00068 746 FunFam RING/U-box superfamily protein 666 746 - -
Pral5265g00068 746 ProSiteProfiles Zinc finger RING-type profile. 701 742 IPR001841 -
Pral5265g00068 746 CDD RING-H2_PA-TM-RING 700 742 - -
Pral5265g00068 746 MobiDBLite consensus disorder prediction 559 574 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral5265g00068 Pral-Chr5265 383051 389600 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral5265g00068 498 745 C3H Transcription Factor Family AT1G04790 50.394 1.55e-67 233
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral5265g00068 - - aprc:113872307 726.857