Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral5265g00066 ATGAATAGTGAGGCTCCAGGCACTCCTGGCCAATGGCTCAAAGGTGCAGTAACTGCTGGTTCAAACGAGAGAATCCTTTTAGACAGCAATGAAGACAATATATGTTCGCAGACAGGCGAAGAATTTGCAACTGAGTTCTATCGTGATCGGTTTGGTTTGAGGAGATCCACTGTCACAACTGATGTGGACAATCATCAGCCAAATAGATCGGGTTGTGATTATAATCAGAATTATCAGGCAGTTTATGACGATCTTGCACGCGTTGTTGGAATAAAGAGAATGGACTCTGATAGTAATTCGGATTTGTCAGATTTCGCTGCAACATCAGGATACGTTGCTGAACCTGAAAGCAGGTCATATCCTAACAATCTGAACAAGTTCCAGTGGGAACATGGTGGTATTGGACAACGATCTGGCAAATTTACTGAAGAAATTTATTTGGATCCAATTTCTTCAGGACCAACTGCTCCGCCCATTTATGCAGCTGAATCCCTTCCGTCCTGTCATCCTTATCCACCGGCGCTTTCAGATGCTTCGTTGTATAAGAAGATAAAATTTCTTTGTAGCTTTGGAGGGAGAATCTTACCTAGGCCAAATGATGGGAAGCTCAGATATGTGGGAGGAGAAACACGGATTATATCCATAAGGAAAAACATTGCTTGGAAGCAACTTATGGAGAAGACTCATGCAATATGGAACCAAGCTCATATTATCAAATACCAGCTTCCTGGAGAGGATCTGGATGCTCTTATTTCTGTTTGTTCTAATGAGGATCTTCATCATATGATAGAGGAGTATGAAGAAGTTGAAAGAATTGGAGGCTCTCAACGTCTGCGGATATTTCTCATATCATCAAGTGAATCTGAGAACCCGAACTCTGTTGAAGCAAAAGTCAATCTGCCAGGTGATGTTGACTATCAGTATGTCGTAGCTGTTAATGGCATGCTGGAACCAAGTCCTCGGATGAGCTCCAGTGGGCAAGGTTTGGTAAGCCAAACAAGCCAGTTTGCAAATTCCTCTGATTTCAATAGTCCAAGATTGTTCAAGGAATCAACTGCATCTGCATATGCTTGGGATGTGAAGGATCGCAGTCCAATGTCCCCTCGTTTGGGAGGATTGCTCAATAAAGCTGGTTCTCAGTTTTTAACAGCACTTCAAGCGCCAGGGAAATCATTCAATCAATCACCACCTAGTCCTATATCTGGTATTCGTGCTCAGACTAAAGATCATGAAATTTCCAACAAAGAGCTAATTACAGACCAGCCATGCAATGTTGGTAAGGGAGGCCTTGTTCCCTTTGTGAAGGAAAGAATTCAATGTGGCAATTCCTTGTACAGAGATGATGCCCATTATGTTGATCCAGCTGCATACTATAACAACCTAGCCCAAGGACCTCCTTTGAATTATCATCATAATAATCAACATATAGTGGAGGTTGGTCAGCCCAAGAATCACAATGATGGTGTTCAATATCACATGAGAAGCCATAGTGAAAACTTTGACTCTTCTGCAACGTGTGGTCAAGGTGATATGATATCTGAGAGACCCCCACGTCCACACGAGGGTTCATTCCATTTTGAGAAGAATCTCTCTCATCCTGAAGGCTCATCATTAGTAATTTCAGCCTCTAATGATAGAGATAGAGAGAGGTCCCATTGCAGATTATTGCATGCACTGTCTGACCCAATGTTGCAAAGTGATGAGAAGTCTGAAGATCACTTGCGTCCCTCCCTTAAAGTAAAGGGCAACAAGTCGCCTTTTCTGCAAGTTTCAAGTTCTTTCCGGGAAAGGCCGTTTCAGGAGGGGGAGGTAATTGATGAAAAAAAACTGATAGCTGAGTATAAAATTCCGCCCAGTTTTGGAAAAACTGGCAGTTTCAAGGGGATTTTGAATCCCAATCAAGGGAGCTTCCAACTTGCAGATAATAACAATGCCTGTTCTGGGGAAATTGGAAGATTTGGAGGTAATAGTGAAGTTATATCACATGAAAGTGTCTTGCATATCAAAGATTTGGAGGGCGTCAATTACAAACAAGTTGGTTGCCAGTCTTCAGTAGACTCACAAAGCAGTGAATGCAAATTACATGCTTCCTCATTGAAGTCTGAATCTACAAGAAACCTGAAGGAGCAACCACATGGTCTGCTACCAGACATGGCTGCTTCTGAGTTTTTTATGAGAAGCCAAAATTCTACGATGTATCTTCAATTTACTATGTCGACAACAGATAACAGCGAGTCATCTCACCATGGATCCTCTGATTTACAGCTTATTGACTCCCAAACTGACGTAGAGTCCATACTGTTAGCCTCTAGTAAGGGATCAGCTTCCAGAGGGGAGATTTTTCTCTCTGGTGAGAATCCTGCCAATTTTCCTCACCAGAAGAATGACAAGATTGTCTATGACCAAGATTCTTTTGTTGGGTATAGCATTGAGCTACGTAACCAGTCACAGAGCTCTGTTACTTGTCGAGAAATGAAGCAGCTAAATGCAGCAGCTATTGTTAAAGGGCCAACTGATAGTGGCTCTTCAGGTGTAGAAGAAGAGGATGAATCTGAAGCTGTGTTTCTTAAAAGGGAAGAAAGTGCCAGTCCAGAATCTCAAAGTGAGTTTGCAAAAATTGATAGTCAAAACTTCAATAAGTCAATTGGATCAGCAAGTGCTGAAATAGAGGCTGAACTCTATGGTTTGCAGATTATTAAGAATGCTGATATTGAAGAATTGCAAGAGCTAGGATCTGGAACATTTGGAACTGTTTATCATGGAAAGTGGAGGGGAACAGATGTTGCAATCAAGAGGATAAAAAGTAGTTGTTTTTCTGGCAGATTATCAGAGCAAGAGCGGTTGAAAAGAGAGTTCTGGCGAGAGGCAAAAATTTTGTCAACTCTTCACCATCCAAACGTGGTGGCCTTTTATGGGGTAGCTCCAGATGGCCCGGGTGGGACATTGGCAACTCTTACAGAATATATGGTACATGGATCACTGAGGAATGTTCTCTTGAAGAAGGAAAAAGTGCTTGACCGCCGAAAACGTCTTATGATTGCAACGGATGCAGCCTTTGGCATGGAATACTTGCATTTTAAGAATGTCGTTCATTTCGATTTGAAGTGTGATAATTTACTTGTCAATTTGGGGGATCCCGAACGGCCTGTGTGCAAGGTTGCTGATTTTGGCCTATCAAGAATTAAACGTAACACTCTTGTTTCTGGTGGTGTCAGAGGAACCCTTCCCTGGATGGCACCAGAATTATTAGATGGCAACAGTAGTGGGGTCTCTGAGAAGGTTGATGTTTTCTCATTTGGCATTGCCATGTGGGAGATCTTGACTGGGGAAGAGCCATATGCTAGCATGCATTGTGGTGCCATCATAGGTGGAATTGTCAACAATACACTCAGGCCTCCAATCCCAAAACGTTGTGATTCAGAATGGAAGAGATTGATGGAAGAATGTTGGAGCCCTGATCCTGCAGCCAGGCCACCCTTCACAGAAATAACACATAGATTACGCCTCATGCAAGCGGCTCTGCCCAAGAAGAAACACGCTCCTGCAACTTGA 3552 0.4271 MNSEAPGTPGQWLKGAVTAGSNERILLDSNEDNICSQTGEEFATEFYRDRFGLRRSTVTTDVDNHQPNRSGCDYNQNYQAVYDDLARVVGIKRMDSDSNSDLSDFAATSGYVAEPESRSYPNNLNKFQWEHGGIGQRSGKFTEEIYLDPISSGPTAPPIYAAESLPSCHPYPPALSDASLYKKIKFLCSFGGRILPRPNDGKLRYVGGETRIISIRKNIAWKQLMEKTHAIWNQAHIIKYQLPGEDLDALISVCSNEDLHHMIEEYEEVERIGGSQRLRIFLISSSESENPNSVEAKVNLPGDVDYQYVVAVNGMLEPSPRMSSSGQGLVSQTSQFANSSDFNSPRLFKESTASAYAWDVKDRSPMSPRLGGLLNKAGSQFLTALQAPGKSFNQSPPSPISGIRAQTKDHEISNKELITDQPCNVGKGGLVPFVKERIQCGNSLYRDDAHYVDPAAYYNNLAQGPPXLNYHHNNQHIVEVGQPKNHNDGVQYHMRSHSENFDSSATCGQGDMISERPPRPHEGSFHFEKNLSHPEGSSLVISASNDRDRERSHCRLLHALSDPMLQSDEKSEDHLRPSLKVKGNKSPFLQVSSSFRERPFQEGEVIDEKKLIAEYKIPPSFGKTGSFKGILNPNQGSFQLADNNNACSGEIGRFGGNSEVISHESVLHIKDLEGVNYKQVGCQSSVDSQSSECKLHASSLKSESTRNLKEQPHGLLPDMAASEFFMRSQNSTMYLQFTMSTTDNSESSHHGSSDLQLIDSQTDVESILLASSKGSASRGEIFLSGENPANFPHQKNDKIVYDQDSFVGYSIELRNQSQSSVTCREMKQLNAAAIVKGPTDSGSSGVEEEDESEAVFLKREESASPESQSEFAKIDSQNFNKSIGSASAEIEAELYGLQIIKNADIEELQELGSGTFGTVYHGKWRGTDVAIKRIKSSCFSGRLSEQERLKREFWREAKILSTLHHPNVVAFYGVAPDGPGGTLATLTEYMVHGSLRNVLLKKEKVLDRRKRLMIATDAAFGMEYLHFKNVVHFDLKCDNLLVNLGDPERPVCKVADFGLSRIKRNTLVSGGVRGTLPWMAPELLDGNSSGVSEKVDVFSFGIAMWEILTGEEPYASMHCGAIIGGIVNNTLRPPIPKRCDSEWKRLMEECWSPDPAARPPFTEITHRLRLMQAALPKKKHAPAT 1184
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral5265g00066 1184 CDD STKc_MAP3K-like 911 1168 - -
Pral5265g00066 1184 Gene3D Phosphorylase Kinase; domain 1 898 992 - -
Pral5265g00066 1184 PANTHER SERINE-THREONINE PROTEIN KINASE 250 1169 - -
Pral5265g00066 1184 Pfam Protein tyrosine and serine/threonine kinase 907 1168 IPR001245 GO:0004672|GO:0006468
Pral5265g00066 1184 Gene3D - 202 285 - -
Pral5265g00066 1184 Gene3D Transferase(Phosphotransferase) domain 1 993 1182 - -
Pral5265g00066 1184 ProSitePatterns Protein kinases ATP-binding region signature. 911 932 IPR017441 GO:0005524
Pral5265g00066 1184 CDD PB1_UP2 187 283 - -
Pral5265g00066 1184 ProSiteProfiles Protein kinase domain profile. 905 1170 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pral5265g00066 1184 SUPERFAMILY Protein kinase-like (PK-like) 892 1168 IPR011009 -
Pral5265g00066 1184 MobiDBLite consensus disorder prediction 500 545 - -
Pral5265g00066 1184 MobiDBLite consensus disorder prediction 515 529 - -
Pral5265g00066 1184 PRINTS Tyrosine kinase catalytic domain signature 1024 1042 IPR001245 GO:0004672|GO:0006468
Pral5265g00066 1184 PRINTS Tyrosine kinase catalytic domain signature 1095 1117 IPR001245 GO:0004672|GO:0006468
Pral5265g00066 1184 PRINTS Tyrosine kinase catalytic domain signature 987 1000 IPR001245 GO:0004672|GO:0006468
Pral5265g00066 1184 PRINTS Tyrosine kinase catalytic domain signature 1139 1161 IPR001245 GO:0004672|GO:0006468
Pral5265g00066 1184 Pfam PB1 domain 199 282 IPR000270 GO:0005515
Pral5265g00066 1184 MobiDBLite consensus disorder prediction 836 860 - -
Pral5265g00066 1184 ProSitePatterns Serine/Threonine protein kinases active-site signature. 1030 1042 IPR008271 GO:0004672|GO:0006468
Pral5265g00066 1184 SMART serkin_6 905 1171 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pral5265g00066 1184 SMART PB1_new 198 285 IPR000270 GO:0005515
Pral5265g00066 1184 SUPERFAMILY CAD & PB1 domains 199 289 - -
Pral5265g00066 1184 FunFam Octicosapeptide/phox/Bem1p domain kinase superfamily protein 898 992 - -
Pral5265g00066 1184 FunFam Octicosapeptide/phox/Bem1p domain kinase superfamily protein 203 285 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral5265g00066 Pral-Chr5265 368192 374670 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral5265g00066 37 334 MAP Kinase Kinase Kinase AT1G16270 40.604 1.98e-43 170
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK TKL-Pl-6 Pral5265g00066 PK_Tyr_Ser-Thr 1.1e-61 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral5265g00066 - - pcin:129308082 1959.88