Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral5265g00058 ATGAGGCAGATATTGGTATTTTTCTTCTCTGTCTTCTCGCTTTTCAGTGCCTTTTTCTTTGTCGTCACCACTGTCTTGTGTACCCATGCTTTCTCTTATAACCATGAAGCGTATCTGCTTTATTCATGGCTTCACAGCTCACCCTCCCCAGCCCCTTCACATTTCTCTGACTGGAACATTCGTGACAGAAACCCATGCAATTGGACCTCCATAACTTGTTCTCCTCAAGGTTTTGTCGCAAAAATTGATGTTGTTTCTGTCCCTCTTAACTTGCCTCTACCTTCCAATCTCTCGTCCTTTCGTTTCCTTAGAGAACTTGTCATGTCAGATGCAAATCTCATTGGAAATATCACTTTCGATATTGGTGCTTGTTCTGGCCTTACTGTTATTGATCTTAGCCATAACAACCTCACTGGCTCCATTCCTGCGAGTGTTGGGAATTTACCAAATCTGGAGACTTTGGCCTTAAACTCCAACTTTCTCAGCGGAGAAATCCCAAGTGAGCTAAGTAATTGCACTGGCCTAAAATATCTCGTCCTTTCAAATAATCAGCTCGGTGGGACTATCCCGCCTTTGTTGGGAAAATTATCAAAACTTCAGGTTTTTAGAGCAGGAAGGAATAAACTCATTGCCGGGAGTATACCACATGAGCTGGAAAATTGCACTAGTTTGATTTATTTGGGGTTGACTGGAACCAGCATATCGGGCTCTTTGCCAGCTTCATTGGGTAGGCTTAAAAAGCTTCAAAGGTTGTCTGTTTGTGATACTATGCTTTCTGGTAAGATTCCATCGGAAATAGGTAATTGCTCGGAGCTTGTTGAATTGAGCCTATGCAAAAATAATCTATCAGGCTCTATTCCATCTAATCTAGGGAAGCTTCCAAAGCTGCAGATTTTGAGTTTATGGGATAATTTTATTATTGGGGTTATTCCTAAAGAGTTTGGTAATTGTACAAGCTTGAGAACACTTGAGCTTTCTATGAATTCTCTATCTGGAACCATCCCTCTATCTGTAGGTAATCTCATGAAGCTCGAGAAGTTTTTGGTTGCTCAAAACAATATCTCTGGTTTTATACCTTCAACTCTTTCAAATGCCACAAATCTGCAGCGTTTGGAGCTTTACAAGAATCAAATCTCAGGCTTGATTCCACTAGAGCTTGGGAGGTTGCAAAAGCTCACTCAGTTCTATGCTTGGCACAACCAGCTAGAAGGAACCATCCCTTCTACTCTAGCCAATCTCAGTAACCTCCAAAAGCTAGATTTATCTTGGAATTCATTTACTGGAAGCATTCCAAAAGGCCTCTTTCTACTTCAAAACCTCACAGAGTTGGAGTTAGTTTTCACTAATATCTCAGGAGCGATTCCACTTGAGATAGGAAGTTGCAGCTCTCTTGAAAGGCTGAATCTTAGAAACAATCGAATTTATGGTGAGATTCCAAAGACAATTGGTGGTTTGAAGAACTTAAACTTTTGTGATATCTCTGACAACCACCTGAACGGGTCATTGCCAGATGATATTGGTGGCTGCTTAAAATTGGAAATGATAAACCTGAGCAACAATGACTTGGAAGGTCCACTGCCTGAGTCATTGTCAACACTACCTAATCTTTTAGTGTTGAATGCGTCTAATAATAAATTTGAAGGTCAAATACCAGCCAGCTTGGGTCATCTTTCTTCCTTGATTGATCTGCTACTTAGCAGAAACAAATTCTCTGGAACCATTCCTCAATCACTTGGTTTATGTTCAAAACTCCAAATGCTTGATCTTAGTAGCAATGAACTCACTGGAAGCATACCAAAAGAGTTAGGTGATATCAAAACTCTTGCAGTTGTTCTTAACCTTAGTCACAACTCTCTTAAAGGACCAATTCCTGCTGAAATCTCCAAGCTAAACATGCTCTCAGCGATGGACATCTCACATAATATGTTGAAAGGAGATTTGCGGCCTCTTTCTCACCTTGCAAGTCTTGTTTCTCTTAATATTTCTTACAACAACTTCACTGGCCATCTTCCTGACACTAGGATTTTTAGACTCTTATCACCAGAAGAAATTATGGGAAACACTGGTCTTTGTTCTCGGATTCAGGATTCATGCTTCTTTAATGATTCGCACAGGAAACATTCGACTAAAAACATGAACTCAAGAATTCTTCAACTGGTCATCGGGTTGCTGGTAGCCTTGATAGTGACTTTTATTGTTATAGTGATCATTTCACTTCCCAGGGCAAGAACTATAAGAGACAATGATTCAGAGATGGGAAGCACATGGACATGGCAATTCATTCCATTTCAGAAGTTGAATTTCTCAGCAGAGCAAGTACTTATAGGCTTAAAAGACAAAAATATAATAGGAAAAGGATGCTCAGGAGTTGTGCATCGTGTCGATATTGGTAATGATGAAGCCATAGCCGTGAAGAAATTGTGGCCAACTCCAGTGCTTTCAAGTGAGGGACCCAATGATGACAAGAGAGGAGCATGGGACTCTTTCTCGAGAGAGCTGAAAATCCTCGGTTTAATCCGGCATAGGAACATTGTGAAACTCCTAGGATACTGTTGGAATCACACCACAAGATTGCTCATGTATGAGTATATGCCAAATGGGAGCTTAGACAGTCTACTTCATGAAAGGGAGGATGAAAACTCTCGTTTGGAATGGGAAGTTAGGTACCGAATCTTGCTAGGTGTTTCACAAGGCCTTGCGTATCTTCACCATGATAGTGACCCTCCAATTGTTCATAGAGACATCAAACCCAGTAATATCCTCATTGGACCTGAATTTGATGCTTGCATTGCGGACTTTGGCTTAGCTAAGTTTGTTGACCACTGTGGTTTCGGAAACTCCTCCAGTATGGTCGCTGGTTCTTGGGGATATATTGCGCCTGAGTACGGCTACATGATGAAGATCACAGAGAAGAGTGATGTTTATAGTTTCGGTGTAGTGATGCTGGAAGTCCTGACAGGTAAGAAACCGATTGATCCAAGCATACCGGATGGGTTACACATTGCTGACTGGGTGAGACAAAAGAATGGACAAGTAGAAGTCCTTGACGCTGCCTTACAATCTGCACCAGAATCAGACATAGAAGAGATGAAGGAAGCATTAGGCATTGCCCTATTGTGCTTAGCTTCTGCCCCAAATCAAAGACCTACAATGAGGGATGTGGCAACCATGATCCAGGAAATTAAACAAGTGAGTGAGGAATTAGCAGATTTTGACACCCTTTTAAAGGACTCTCCTACACCTCTTACTGGGGCTGGCGCAGAAACTTCAGAACCTGCAAGACCAAGCTCGTACCTTAAAAGCGACAAAGCAAGCTCCATTGCATCCTCACCAAGGCGTTCATCTTTTGCCATTGTCGAATTGGGCTAA 3369 0.4164 MRQILVFFFSVFSLFSAFFFVVTTVLCTHAFSYNHEAYLLYSWLHSSPSPAPSHFSDWNIRDRNPCNWTSITCSPQGFVAKIDVVSVPLNLPLPSNLSSFRFLRELVMSDANLIGNITFDIGACSGLTVIDLSHNNLTGSIPASVGNLPNLETLALNSNFLSGEIPSELSNCTGLKYLVLSNNQLGGTIPPLLGKLSKLQVFRAGRNKLIAGSIPHELENCTSLIYLGLTGTSISGSLPASLGRLKKLQRLSVCDTMLSGKIPSEIGNCSELVELSLCKNNLSGSIPSNLGKLPKLQILSLWDNFIIGVIPKEFGNCTSLRTLELSMNSLSGTIPLSVGNLMKLEKFLVAQNNISGFIPSTLSNATNLQRLELYKNQISGLIPLELGRLQKLTQFYAWHNQLEGTIPSTLANLSNLQKLDLSWNSFTGSIPKGLFLLQNLTELELVFTNISGAIPLEIGSCSSLERLNLRNNRIYGEIPKTIGGLKNLNFCDISDNHLNGSLPDDIGGCLKLEMINLSNNDLEGPLPESLSTLPNLLVLNASNNKFEGQIPASLGHLSSLIDLLLSRNKFSGTIPQSLGLCSKLQMLDLSSNELTGSIPKELGDIKTLAVVLNLSHNSLKGPIPAEISKLNMLSAMDISHNMLKGDLRPLSHLASLVSLNISYNNFTGHLPDTRIFRLLSPEEIMGNTGLCSRIQDSCFFNDSHRKHSTKNMNSRILQLVIGLLVALIVTFIVIVIISLPRARTIRDNDSEMGSTWTWQFIPFQKLNFSAEQVLIGLKDKNIIGKGCSGVVHRVDIGNDEAIAVKKLWPTPVLSSEGPNDDKRGAWDSFSRELKILGLIRHRNIVKLLGYCWNHTTRLLMYEYMPNGSLDSLLHEREDENSRLEWEVRYRILLGVSQGLAYLHHDSDPPIVHRDIKPSNILIGPEFDACIADFGLAKFVDHCGFGNSSSMVAGSWGYIAPEYGYMMKITEKSDVYSFGVVMLEVLTGKKPIDPSIPDGLHIADWVRQKNGQVEVLDAALQSAPESDIEEMKEALGIALLCLASAPNQRPTMRDVATMIQEIKQVSEELADFDTLLKDSPTPLTGAGAETSEPARPSSYLKSDKASSIASSPRRSSFAIVELG 1122
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral5265g00058 1122 Gene3D Transferase(Phosphotransferase) domain 1 864 1076 - -
Pral5265g00058 1122 ProSitePatterns Serine/Threonine protein kinases active-site signature. 910 922 IPR008271 GO:0004672|GO:0006468
Pral5265g00058 1122 FunFam LRR receptor-like serine/threonine-protein kinase 535 606 - -
Pral5265g00058 1122 Pfam Protein kinase domain 779 1054 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pral5265g00058 1122 SUPERFAMILY Protein kinase-like (PK-like) 764 1058 IPR011009 -
Pral5265g00058 1122 SUPERFAMILY L domain-like 40 403 - -
Pral5265g00058 1122 SMART LRR_typ_2 148 172 IPR003591 -
Pral5265g00058 1122 SMART LRR_typ_2 533 557 IPR003591 -
Pral5265g00058 1122 SMART LRR_typ_2 461 485 IPR003591 -
Pral5265g00058 1122 SMART LRR_typ_2 653 678 IPR003591 -
Pral5265g00058 1122 SMART LRR_typ_2 293 316 IPR003591 -
Pral5265g00058 1122 SMART LRR_typ_2 413 437 IPR003591 -
Pral5265g00058 1122 Pfam Leucine Rich Repeat 415 433 IPR001611 GO:0005515
Pral5265g00058 1122 FunFam LRR receptor-like serine/threonine-protein kinase ERECTA 432 526 - -
Pral5265g00058 1122 ProSitePatterns Protein kinases ATP-binding region signature. 783 806 IPR017441 GO:0005524
Pral5265g00058 1122 Gene3D Ribonuclease Inhibitor 413 701 IPR032675 -
Pral5265g00058 1122 Gene3D Ribonuclease Inhibitor 89 244 IPR032675 -
Pral5265g00058 1122 Gene3D Ribonuclease Inhibitor 245 412 IPR032675 -
Pral5265g00058 1122 Gene3D Phosphorylase Kinase; domain 1 763 863 - -
Pral5265g00058 1122 FunFam LRR receptor-like serine/threonine-protein kinase RCH1 864 1076 - -
Pral5265g00058 1122 FunFam Nuclear pore complex protein NUP107 33 185 - -
Pral5265g00058 1122 SMART serkin_6 777 1062 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pral5265g00058 1122 FunFam Putative LRR receptor-like serine/threonine-protein kinase 611 696 - -
Pral5265g00058 1122 FunFam LRR receptor-like serine/threonine-protein kinase RCH1 208 431 - -
Pral5265g00058 1122 SUPERFAMILY L domain-like 383 700 - -
Pral5265g00058 1122 Pfam Leucine rich repeat 126 185 IPR001611 GO:0005515
Pral5265g00058 1122 Pfam Leucine rich repeat 463 522 IPR001611 GO:0005515
Pral5265g00058 1122 Pfam Leucine rich repeat 271 330 IPR001611 GO:0005515
Pral5265g00058 1122 ProSiteProfiles Protein kinase domain profile. 777 1061 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pral5265g00058 1122 PANTHER LEUCINE RICH REPEAT FAMILY PROTEIN, EXPRESSED 439 1059 - -
Pral5265g00058 1122 MobiDBLite consensus disorder prediction 1094 1113 - -
Pral5265g00058 1122 MobiDBLite consensus disorder prediction 1075 1114 - -
Pral5265g00058 1122 Pfam Leucine rich repeat N-terminal domain 40 74 IPR013210 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral5265g00058 Pral-Chr5265 321615 325404 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral5265g00058 31 1115 Receptor kinase-like Gene Family AT5G56040 43.078 0.0 839
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XI-1 Pral5265g00058 Pkinase 8.9e-42 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral5265g00058 - - pvy:116108224 1279.23