Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral5265g00056 ATGCTTCTGGACAAGAATGCCCATAAAGAAACCCTTTATGATGTTCTTAATGTGAAGGAAGATGCAAGCTATGAAGAGATTCGTGCCAGATACCGCAGTGCTGTGCTCAATTTACATCCTGATAAATTATTGAAGACATCTGAGATGTCAAGCAGTCATCAAACATCAGGAGATAGATTCCTCACTGTACAGAAGGCATGGGAAATTCTCAGCAATTCAACCTCTCGTTCAACATACGACAATGAGCTGCGTGGTTCAAGGCAGGATGCATTGGCTGCAGATGTTGCAGAAGATGTAAGTTTGCAGGATATGATTGTTGAACAAGCTGGAGAAGCGTTGGATCTCTCTTACCAGTGCAGATGTGGTGATTACTTTACCATAGACTCTACAGAATTGGAGAAAATGGGGTATTCGTTGTTGAGGGATGGCAGTGAGATTTCTTTACGTACTGTTGATAGTTTGCCAGGTTCAGTAATTCTTCCATGTGGATCTTGTTCTCTGAAAGTTCGTCTACTAATCAACATGGATGAGAGCAATTAA 540 0.4148 MLLDKNAHKETLYDVLNVKEDASYEEIRARYRSAVLNLHPDKLLKTSEMSSSHQTSGDRFLTVQKAWEILSNSTSRSTYDNELRGSRQDALAADVAEDVSLQDMIVEQAGEALDLSYQCRCGDYFTIDSTELEKMGYSLLRDGSEISLRTVDSLPGSVILPCGSCSLKVRLLINMDESN 179
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral5265g00056 179 Pfam CSL zinc finger 98 172 IPR007872 -
Pral5265g00056 179 PANTHER DPH3 HOMOLOG-RELATED 11 176 IPR044248 GO:0017183|GO:0046872
Pral5265g00056 179 ProSiteProfiles dnaJ domain profile. 11 83 IPR001623 -
Pral5265g00056 179 SUPERFAMILY CSL zinc finger 96 177 IPR036671 -
Pral5265g00056 179 PRINTS DnaJ domain signature 31 46 IPR001623 -
Pral5265g00056 179 PRINTS DnaJ domain signature 13 31 IPR001623 -
Pral5265g00056 179 PRINTS DnaJ domain signature 55 75 IPR001623 -
Pral5265g00056 179 SUPERFAMILY Chaperone J-domain 8 84 IPR036869 -
Pral5265g00056 179 ProSiteProfiles DPH-type metal-binding (MB) domain profile. 95 174 IPR007872 -
Pral5265g00056 179 FunFam DNAJ heat shock N-terminal domain-containing protein-like 89 177 - -
Pral5265g00056 179 Pfam DnaJ domain 12 80 IPR001623 -
Pral5265g00056 179 Gene3D DPH Zinc finger 88 179 IPR036671 -
Pral5265g00056 179 Gene3D DnaJ domain 2 87 IPR036869 -
Pral5265g00056 179 CDD DnaJ 11 72 IPR001623 -
Pral5265g00056 179 SMART dnaj_3 10 75 IPR001623 -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral5265g00056 7 80 C2H2 Transcription Factor Family AT1G74250 36.486 4.84e-09 52.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral5265g00056 K17867 - gmx:100814856 274.633