Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral5265g00051 ATGTCTGGGAATTTCAATAAAAGGAGAGTGTTGGCAGACAGGTGGTCCGGTATTCTACTATTGTTCACTTTACTTCTTCGCACTTCAGAGGGATTGAACACAGAGGGGCAGTACCTGCTTGAGCTGAAGAGTAGTCTTCATGATGAATCTAATCATTTGGCGAATTGGAAGTCTACTGATGAAACACCTTGTGGATGGACGGGTGTAAATTGCACTTATGACTATAATCCAGTGGTCCGGTCCATCGATTTGAGTTCCATGAATCTTTCTGGAACTCTAAATCCCAGCATTGGAGGTCTGACGCATCTAACTTATCTCAATCTTGCCGACAACGGGCTGATAGGAAATGTACCCAGTGAAATCGGAAATTGCTCGAAATTGGAATTTCTTTTTTTGAACAATAACCGATTCAGGGGACCAATTCCTGCTGAACTGGGTAGGCTGTCCCTTTTGAGAAGTTTGAATATTTGCAACAACATATTCTCAGGTTCTCTGCCAGAGGAACTGGGAAACTTGTCTTCACTGGTTGAGCTTGTATTCTACACAAACAATCTGACTGGTCCCCTGCCTCATTCTATTGGAAATCTAAAGAGTCTCACTACTTTAAGAGGTGGAGGAAATAGATTGTCTGGTAGCTTGCCAAGTGAGATCGGTGGATGTACGAGCATGGAATTTCTAGGCCTTGCTCAAAATCTGATAGGAGGAGAACTACCGACAGAGATCGGGATGCTTCAGAACTTAAGAGAACTGCTTTTATGGAATAACCAGTTATCAGGGCTAATTCCTAAGGAGATTGGGAATTGTACCAGCCTTGAAACCCTTGCTTTATATGGAAATGCTCTTGTTGGACCTATACCTGAGGAGATTGGGAATCTCAAGTCTCTGGGGAGATTGTACCTTTACAGAAATAAGTTGAATGGAACCATTCCAAGGACAATTGGGAATCTTTCTCTGGCATTAGAAATTGATTTCTCAGAAAACTCTTTGGTGGGTGATATTCCTTCTGAGATCAGCAAAATAAGTGGTCTCCACTTGCTCTTTCTCTTTGAGAACGAGCTATCGGGTGTTATACCCAGTGAGTTTAGTAGCTTGACGAACCTGACAAGGCTGGACCTGTCCATTAATAATCTCACAGGTCCCGTTCCATTGGGGTTCCAGTATTTGACTCGAATGTCTCAGTTGCAACTTAATGACAACTCTCTAAGTGGAAATATTCCTCAGAGCCTTGGACTTTATAGTCCTCTTTGGGTGGTTGATTTTTCTAACAATCACTTGACGGGAATGATACCTCCTCATCTGTGCCGGAATTCTAACTTGATGCTGTTGAGTCTGGCTTCTAATCGGCTGTATGGAAATATACCAACTGGCATCCTGAATTGTGAAACATTGGCAATGCTACTGTTGGTTGGAAATAGTCTTACTGGTGGCTTTCCTACACAACTGTGCAAACTAGTGAACCTTACTGCCATTGAGCTGAACCAGAACAGGTTCAGTGGTCCTATTTCTCCCGAGATTGAGAGGTGCCAGAAGTTGCAGAGGCTTCATATTGCTAACAACTACTTCACATTAGAGTTGCCTAAAGAAATAGGAAATCTTTCTCAACTAGTGACCTTCAACGTTTCGTCCAATTCTTTCACTGGAACAATTCCCCATGAAATTCTTAGATGCAAGAAGCTTCAGCGACTTGATCTCAGCAGTAACAGCTTTACTGGTTCCCTACCAGATGAGCTCGGAACACTCTCGCAGTTGGAGCTTCTCAAGCTCTCAGATAATAAGCTTACAGGGCATATTCCTCCAACGTTAGGTAATCTACTTCGTTTGACTGCATTGGAGATGGGTGGCAATTTACTTTCGGGAGAAATACCTCCTGATCTGGGTAATCTCACAAGCTTACAGATTGCATTGAATCTCAGTTACAATAACCTTACTGGAAGTATACCTGATGAGCTTGGCAATCTCTTTAAGCTTGAGTTTCTCCTTCTCAATAACAATAAACTGAGTGGTGAAATTCCCAGCACATTCGAAAACCTTCCAAGTTTGTTGGGCTGTAATTTCTCACACAACAATCTTTCTGGGCCTATACCTTCCATTCCAATATTTGAAAATATGGAAGTTAGCAGCTTTGTTGGTAACAATGGCCTCTGTGGTGCTCCTCTGCTTGGCTGCAACACTAATCCATCTTCTCTTTCTGATCCTCCTACGAAAAATGTTAATGCTTCTCGCACCAAGATTATCACCATTATTGCCACAGTGGTTGGTGGCGTTTCTCTCGTTCTAATAGTATTCATTTTATATTTAATGAGACGTCCTCCTGAGCCTATTTCTTCATTGAGGGATTCGGAGATTCCCTCCCCAGATTCAGATATATATTTTCCTCCAAAAGATGGCTTCACCTTCCATGATCTACTTGAAGCTACAAACAGCTTTCATGACAGTTATGTTATTGGAAGAGGGGCTTGTGGAACAGTTTATAAGGCAGTAATGCCATCTGGGAAGACTATTGCTGTTAAAAGGCTAGCATCCAACAGGGAAGGGAACAACATCGAGAATAGTTTCCGGGCTGAGATATTAACTCTTGGGAAGATAAGGCATCGAAATATAGTGAAGTTGTATGGATTTTGCTACCACCAAGGTAGCAATCTCCTACTATATGAGTACATGGCAAGGGGTAGCCTAGGGGAGCAACTTCATGGGTTTGGATGTAATTTGGAATGGCCAACTCGGTTCATGATTGCTCTTGGAGCTGCAGAGGGTCTTGCCTACTTGCATCATGACTGCAAACCAAAGATCATTCACCGTGATATAAAATCAAATAACATTCTACTTGATGAAAACTTTGAGGCCCATGTGGGTGATTTTGGTTTGGCAAAGGTTATTGACATGCCTCAATCAAAGTCAATGTCAGCAGTTGCTGGATCATATGGTTATATTGCTCCTGAGTATGCATACACCATGAAGGTCACTGAGAAGTGTGACATCTATAGCTATGGAGTTGTGCTGTTGGAGTTGCTAACCGGAAGAACGCCGGTTCAGCCGCTAGAGCAAGGAGGCGATCTGGTGACATGGGTCAAAAGCTATATTCGGAGCCATAACAACACCCTGTCCTCTGGTATGCTTGACAATCGTCTCAATATCCAAGGCCAAACCACTGTGAACCACATGCTCACCGTTCTCAAAATTGCTTTGCTCTGCACAAACATGAATCCCACTGATCGCCCACCCATGCGCCAAGTCGTGTTGATGCTTATGGAATCCAACGAGAGAGAAGGAAACTTGGCCATTTCTCCATCTCGATACGAGGACCTCGCTTCCAAAGAAGATGATGAGCAAAAGAGTACGTGA 3342 0.4303 MSGNFNKRRVLADRWSGILLLFTLLLRTSEGLNTEGQYLLELKSSLHDESNHLANWKSTDETPCGWTGVNCTYDYNPVVRSIDLSSMNLSGTLNPSIGGLTHLTYLNLADNGLIGNVPSEIGNCSKLEFLFLNNNRFRGPIPAELGRLSLLRSLNICNNIFSGSLPEELGNLSSLVELVFYTNNLTGPLPHSIGNLKSLTTLRGGGNRLSGSLPSEIGGCTSMEFLGLAQNLIGGELPTEIGMLQNLRELLLWNNQLSGLIPKEIGNCTSLETLALYGNALVGPIPEEIGNLKSLGRLYLYRNKLNGTIPRTIGNLSLALEIDFSENSLVGDIPSEISKISGLHLLFLFENELSGVIPSEFSSLTNLTRLDLSINNLTGPVPLGFQYLTRMSQLQLNDNSLSGNIPQSLGLYSPLWVVDFSNNHLTGMIPPHLCRNSNLMLLSLASNRLYGNIPTGILNCETLAMLLLVGNSLTGGFPTQLCKLVNLTAIELNQNRFSGPISPEIERCQKLQRLHIANNYFTLELPKEIGNLSQLVTFNVSSNSFTGTIPHEILRCKKLQRLDLSSNSFTGSLPDELGTLSQLELLKLSDNKLTGHIPPTLGNLLRLTALEMGGNLLSGEIPPDLGNLTSLQIALNLSYNNLTGSIPDELGNLFKLEFLLLNNNKLSGEIPSTFENLPSLLGCNFSHNNLSGPIPSIPIFENMEVSSFVGNNGLCGAPLLGCNTNPSSLSDPPTKNVNASRTKIITIIATVVGGVSLVLIVFILYLMRRPPEPISSLRDSEIPSPDSDIYFPPKDGFTFHDLLEATNSFHDSYVIGRGACGTVYKAVMPSGKTIAVKRLASNREGNNIENSFRAEILTLGKIRHRNIVKLYGFCYHQGSNLLLYEYMARGSLGEQLHGFGCNLEWPTRFMIALGAAEGLAYLHHDCKPKIIHRDIKSNNILLDENFEAHVGDFGLAKVIDMPQSKSMSAVAGSYGYIAPEYAYTMKVTEKCDIYSYGVVLLELLTGRTPVQPLEQGGDLVTWVKSYIRSHNNTLSSGMLDNRLNIQGQTTVNHMLTVLKIALLCTNMNPTDRPPMRQVVLMLMESNEREGNLAISPSRYEDLASKEDDEQKST 1113
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral5265g00051 1113 ProSitePatterns Serine/Threonine protein kinases active-site signature. 930 942 IPR008271 GO:0004672|GO:0006468
Pral5265g00051 1113 FunFam Probable leucine-rich repeat receptor-like protein kinase At2g33170 190 283 - -
Pral5265g00051 1113 FunFam Leucine-rich repeat receptor-like serine/threonine-protein kinase isoform B 284 388 - -
Pral5265g00051 1113 FunFam Leucine-rich repeat receptor-like serine/threonine-protein kinase At1g17230 887 1098 - -
Pral5265g00051 1113 Pfam Protein kinase domain 810 1079 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pral5265g00051 1113 Pfam Leucine rich repeat 246 305 IPR001611 GO:0005515
Pral5265g00051 1113 ProSiteProfiles Protein kinase domain profile. 809 1083 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pral5265g00051 1113 Gene3D Transferase(Phosphotransferase) domain 1 887 1101 - -
Pral5265g00051 1113 SUPERFAMILY Protein kinase-like (PK-like) 784 1082 IPR011009 -
Pral5265g00051 1113 Gene3D Ribonuclease Inhibitor 32 190 IPR032675 -
Pral5265g00051 1113 SUPERFAMILY L domain-like 33 334 - -
Pral5265g00051 1113 FunFam Leucine-rich repeat receptor-like protein kinase PEPR1 31 189 - -
Pral5265g00051 1113 SMART LRR_typ_2 364 387 IPR003591 -
Pral5265g00051 1113 SMART LRR_typ_2 196 220 IPR003591 -
Pral5265g00051 1113 SMART LRR_typ_2 653 676 IPR003591 -
Pral5265g00051 1113 SMART LRR_typ_2 292 316 IPR003591 -
Pral5265g00051 1113 SMART LRR_typ_2 532 556 IPR003591 -
Pral5265g00051 1113 SMART LRR_typ_2 244 268 IPR003591 -
Pral5265g00051 1113 SMART LRR_typ_2 100 124 IPR003591 -
Pral5265g00051 1113 SMART LRR_typ_2 580 604 IPR003591 -
Pral5265g00051 1113 Gene3D Ribonuclease Inhibitor 387 726 IPR032675 -
Pral5265g00051 1113 FunFam Leucine-rich repeat receptor-like serine/threonine-protein kinase 775 886 - -
Pral5265g00051 1113 FunFam Leucine-rich repeat receptor-like serine/threonine-protein kinase At1g17230 412 726 - -
Pral5265g00051 1113 Gene3D Ribonuclease Inhibitor 191 320 IPR032675 -
Pral5265g00051 1113 SUPERFAMILY L domain-like 385 722 - -
Pral5265g00051 1113 Gene3D Ribonuclease Inhibitor 321 386 IPR032675 -
Pral5265g00051 1113 MobiDBLite consensus disorder prediction 1094 1113 - -
Pral5265g00051 1113 PANTHER LEUCINE RICH REPEAT FAMILY PROTEIN, EXPRESSED 478 1083 - -
Pral5265g00051 1113 SMART serkin_6 809 1082 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pral5265g00051 1113 Pfam Leucine rich repeat N-terminal domain 33 71 IPR013210 -
Pral5265g00051 1113 Gene3D Phosphorylase Kinase; domain 1 783 886 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral5265g00051 Pral-Chr5265 291387 296605 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral5265g00051 32 1084 Receptor kinase-like Gene Family AT5G56040 36.585 0.0 629
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XI-1 Pral5265g00051 Pkinase 2.8e-47 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral5265g00051 - - qsa:O6P43_003073 1630.92