Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral5265g00028 ATGATGGCTACTACAATTAATTTCAGAGTTGGAACTCAAGTTTTTGTTGAGGACCCTGAGGTAGCTTGGATAGACGGAGAAATTGTGGAAACTAATGGCGAAGAGATCAAAGTTAAGTGTGCGTCAGACAAGATGGTTGTGGTCAAAGCCTCCAATGTCCATCCCAAGGATCCTGAGTTCCCTCCTGCTGGTGTGGATGATATGACAAGGCTGGCATATCTGCATGAGCCAGGGGTTCTCCAGAATTTGCAATGTCGGTATGACACCAATGAGATATATACATACACAGGAAATATATTGATTGCCGTGAACCCTTTTCAAAGATTACCTCATTTGTATGGCCACGATGTGATGCAAAAGTATAAAGGATCAGCGATTGGTGAATTGAGCCCACATCCTTTTGCAATTGCTGATTCTGCGTTTAGGATGATGTTAAATGAAGGAACAAGCCAATCAATTTTGGTCAGTGGTGAAAGTGGAGCGGGCAAAACAGAGAGCACAAAGATGCTTATGCATTATCTCGCCTTCATGGGTGGGAGAAAGGAGTCTGAGGGACGATCTGTGGAGCAACAAGTTCTAGAGTCCAATCCTGTTTTAGAAGCATTTGGCAATGCAAAGACAGTTAGAAACAATAACTCAAGTCGATTTGGGAAGTTTGTGGAGCTACAGTTTGATCAGAGGGGGAGAATTTCAGGAGCTGCTATTAGAACTTATTTGCTGGAACGATCCCGCGTCTGTCAAGTTTCAGATCCTGAGAGAAACTATCATTGTTTTTATATGATTTGTGCTGCACCAGAAGAGGATATTAAAAGGTTTAAATTGGAAAATCCAAGAACGTATCATTACCTAAACCAATCAAATTTCTTCGAATTGGATGGTTTGGATGAATCCAAGGAGTACCTTGCAACTAGGAGAGCCATGGAGGTTGTTGGCATCACTTCTGATGAGCAGGAAGCTATATTTAGAGTAGTAGCTGCAATACTGCATTTAGGAAACATTGAATTTGCCAAGGGGGATGAGCCAGATTCCTCTGAACCCAAGGATGATCAATCCCGTTTCCACCTAAAAACTACTGCTGAACTTTTGATGTGCGACGAGAGGTCACTTGAGGACTCCCTGTGCAAACGTGTCATGGTAACACGTGGTGAGGCCATAACAAAATGGCTTGATCCAAATTTGGCAGCTCTCAGTAGAGATTCATTGGCCAAAATAGTTTACTCAAAGCTGTTTGACTGGATTGTGAAAAAGATTAATAACTCCATCGGTCAAGATCCAAACTCGAAGAACTTAATTGGGGTTCTGGATATATATGGATTTGAGAGTTTCAAGACAAACAGTTTTGAGCAATTTTGTATCAACCTGACAAATGAGAAATTACAGCAACATTTCAACCAGCATGTCTTCAAAATGGAGCAAGAGGAATATACAAAGGAAGAGATTAACTGGAGTTATATAGAGTTCATTGATAATCAGGATGTCCTTGATCTCATCGAGAAGAAACCTGGCGGCATCATTGCTCTTCTTGATGAGGCTTGCATGTTTCCAAGATCAACACACGAAACATTTGCCGAAAAGTTATATCAAACTTTTAAAGACAATAAACGCTTCAGCAAACCGAAGTTATCTCGTACTGATTTCACCATCTGCCACTATGCCGGTGATGTCACTTATCAGACTGACTTGTTCCTTGACAAGAACAAAGACTACGTTGTTCCAGAGTTCGAGGCACTACTCAACGCTTCAAAGTGCTCCTTCGTTTCTGGATTGTTTCCACCTCAACCTGAGGAAACTTCCAAATCATCAAAGTTCTCCTCAATAGCCACCCAGTTTAAGCAACAACTTCAATCTTTGCTTGAAACGCTGAATGCTACTGAGCCGCATTACATTCGTTGCATAAAGCCAAATAATCTTCTCAAGCCAAGGATATTTGAGAACACTAATGTGTTACAGCAGCTTCAATGTGGGGGAGTAATGGAGGCAATTCGGATAAGTTGTGCTGGATACCCAACTAGAAAGCAGTTTGATGAATTTGTTAAGCGGTTTGGAGTTCTGGCACCTGACGTTCTGAAAGGATGCCCTGATGAGAGGACTGCTTGCGTGAAGCTGCTAGGACAAGTAAATCTTGAAGATTATCAGGTGGGCAAGACTAAAGTATTTCTGAGAGCAGGACAGATGGCAAAACTAGATGCATGTCGTGCTGAGGTCTTAGGACGATCTGCAACCATTATTCAGAGTAAAGTCCGCTCATTTTTTGGTCACAAAAAATACGTTTTGTTGCGGTTTTCTGCCATACAAATACAAACAATCTGTAGAGGAGAACTTGCGCGCTGTCTGTGCGAGAAAATGAGGAGGGAAGCTGCTTCTGTAAAAATTCAAAAGAATGGGCGCATGTATATTGCTAAAACATCTTATAAAACTTTGCGTGCCTCAGCCATTTCCATTCAAACCGGTATGCGATGCATGGCTGCTAGAAATGAGCTCAAGTGCAGAAGGCGAACGGAAGCTACAATTGTTATCCAAAGTCACTGCCGTGGTTATATAGCCTACGTCCAACTCCTGAGGCTAAGGGAAGCAGCAATAATTATACAGTGTGTCTCGAGGGGACAAATGGCTCGTAAAGAACTTCGAAAGCTTCAGATGGCTGCTAGGGAAACCGGTGCTCTCAAAGCTGCCAAAGAAAAACTTGAAAAGGAAGTTGAAGAATTAAAATCTTCTCTACAAATGGAGAAGAAGATTATGACTGATGTCGAACAAGAAAATGCAAAATTGCAATCTGCCTTGGAAGAGACTAAGGAGGCAAATTCAAAATTGCAATCTGTTTTGGAGGAGATTAAAGAGGAAAATGCAAAATTGCAAATTTCCTTGGAAGAGACGAAGGCATCTCTCTTTCAGGAGCGCCAGGCAGCAAAAAATGTGGGTGAGCCAAATACTAATACAGAAGAGTGTCCTGTTGTTGAAATGATGATCAAGAAGTTAACAACAGAAAATGACCATCTCAAGGCACTGGTTAAGTCACTGGAAAAGAAAGTTGATGACGTTGAGAGGAAATCCGTGGAAAGTGAAGGCAAGCTTACTCAAGACCAAGATACTAAAACAGCGTCCGTTCAAGAACATGGCGCAGCAGGCAAAGCAGCTGATTTATTCTCTGGTATACGAGAATTTCCAGTTGGTGACAATGAAATGAACAATAACCTTGCGGCAGAGAATGAAAATCTCAAGGCGCTGGTCAATTCATTAGAAAAGAAAATTGATGAAACTAACAGGCTTAGTGACGAGCGCTTGAAGCAAGCATCAGAAGCTGAAACAAAAGTAATTGAGCTGAAGATGGCTATGCAGAGGCTTGAAGAAAAACTATCTGATATAGAAACAGAGGATCAAATTTTGAGGCAGCAAGCTCTACTGAGTTCATCTTCTAGGCGAATGTCAGGACAATTATCATTTTCTAATTCTCAGCCGTCAGAGAATGGTCAAGATGATGCGAGTGGTACACCGAGAAAAAAATTTGGGACAGAGGCTGATAAAGAGTTGAGGAGATCTCAAGCTGAAAGACAACAAGAGAGTCTAGATGCTCTTCTGAAATGCGTTGCAGAAGCAAACCTTGGGTTCAGTGAAGGGAAGCCGGTTGCAGTTTATACCATTTATAAGTGTTTGCTACACTGGAGATCTTTTGAAGCAGAAAAGACAAGTGTATTTGATCGTCTTATTCAGTTGTTTGGTTCTGCTATAGAGGATCAGGACAATAATGATCACATGGCTTATTGGTTATCCAATACGTCTGCATTGTTATTTCTTCTTCAGCAAAGTCTCAGACCACCTTCAGCACAGAAACCTCCTCCCCCCGCAACATCTTTTTTTGGAAGGATTTCCCAAAGTTTTCGTTCATCTACTGCTGGTACTGCACTTGATACAATTCGCCAAGTTGATGCCAAGTATCCAGCTTTGCTTTTCAAACAGCAACTTACAGCATATGTGGAAAAGATTTATGGAATTGTTCGAGAGAATTTGAAGAAGGACTTGTCACCTCTGCTTACTTCTTGCATTCAGGCACCTAAAACATCAGAGCAAAGCCAATCAGATGAACAGTCAACTGATAATAGCGCCCCAGCTGCTTCTTGGCAGAACATCATTGATTGCCTTGACAAATTTCTCAATATGATGAAAGAAAAACATGTGCCTCCTGTTCTGGTTCAGAAGATATTGACCCAGGTTTTCCAGTACATCAATGTGCAACTCTTTAATAGCCTCCTTTCAAATAAAGAATATTGCACAGTTACCAATGGAGAATTTCTAAAATCGGGGTTGGATGAATTAGAGAAATGGTGTAGTGAAGCCACAGAAGAGTATGCTGGTTCATCTTGGGATGACCTCAAACACGTGAGGCAAGCAGTTGGATTCTTGGCCAAAAATGAGAAGACCACAATATCCTATGACGATCTCACTAACGATCTGTGTCCTATCCTGAGTGTTCATCAGCTTTACAAAATCTGTTTACTTTACGGGGATGGCAGTGAGAGTGAACAATGCGTATCAACAGATGTCACCACCAGGTTGAAGCTTCTAATGACAGATGATGCAAATGACGACAGCGACTCCTTCATGTTGGACGATAATTCAAGTATCCCATACTCAGTTGATGAGATTTCTAATTCCCTTCAAGGAAGTAACTCATTGAAAGTACAAGCGCCAGCAGAACTTCTTAGCAATTCAGCTTTCCAATTTTTACATGACTGA 4731 0.4147 MMATTINFRVGTQVFVEDPEVAWIDGEIVETNGEEIKVKCASDKMVVVKASNVHPKDPEFPPAGVDDMTRLAYLHEPGVLQNLQCRYDTNEIYTYTGNILIAVNPFQRLPHLYGHDVMQKYKGSAIGELSPHPFAIADSAFRMMLNEGTSQSILVSGESGAGKTESTKMLMHYLAFMGGRKESEGRSVEQQVLESNPVLEAFGNAKTVRNNNSSRFGKFVELQFDQRGRISGAAIRTYLLERSRVCQVSDPERNYHCFYMICAAPEEDIKRFKLENPRTYHYLNQSNFFELDGLDESKEYLATRRAMEVVGITSDEQEAIFRVVAAILHLGNIEFAKGDEPDSSEPKDDQSRFHLKTTAELLMCDERSLEDSLCKRVMVTRGEAITKWLDPNLAALSRDSLAKIVYSKLFDWIVKKINNSIGQDPNSKNLIGVLDIYGFESFKTNSFEQFCINLTNEKLQQHFNQHVFKMEQEEYTKEEINWSYIEFIDNQDVLDLIEKKPGGIIALLDEACMFPRSTHETFAEKLYQTFKDNKRFSKPKLSRTDFTICHYAGDVTYQTDLFLDKNKDYVVPEFEALLNASKCSFVSGLFPPQPEETSKSSKFSSIATQFKQQLQSLLETLNATEPHYIRCIKPNNLLKPRIFENTNVLQQLQCGGVMEAIRISCAGYPTRKQFDEFVKRFGVLAPDVLKGCPDERTACVKLLGQVNLEDYQVGKTKVFLRAGQMAKLDACRAEVLGRSATIIQSKVRSFFGHKKYVLLRFSAIQIQTICRGELARCLCEKMRREAASVKIQKNGRMYIAKTSYKTLRASAISIQTGMRCMAARNELKCRRRTEATIVIQSHCRGYIAYVQLLRLREAAIIIQCVSRGQMARKELRKLQMAARETGALKAAKEKLEKEVEELKSSLQMEKKIMTDVEQENAKLQSALEETKEANSKLQSVLEEIKEENAKLQISLEETKASLFQERQAAKNVGEPNTNTEECPVVEMIXIKKLTTENDHLKALVKSLEKKVDDVERKSVESEGKLTQDQDTKTASVQEHGAAGKAADLFSGIREFPVGDNEMNNNLAAENENLKALVNSLEKKIDETNRLSDERLKQASEAETKVIELKMAMQRLEEKLSDIETEDQILRQQALLSSSSRRMSGQLSFSNSQPSENGQDDASGTPRKKFGTEADKELRRSQAERQQESLDALLKCVAEANLGFSEGKPVAVYTIYKCLLHWRSFEAEKTSVFDRLIQLFGSAIEDQDNNDHMAYWLSNTSALLFLLQQSLRPPSAQKPPPPATSFFGRISQSFRSSTAGTALDTIRQVDAKYPALLFKQQLTAYVEKIYGIVRENLKKDLSPLLTSCIQAPKTSEQSQSDEQSTDNSAPAASWQNIIDCLDKFLNMMKEKHVPPVLVQKILTQVFQYINVQLFNSLLSNKEYCTVTNGEFLKSGLDELEKWCSEATEEYAGSSWDDLKHVRQAVGFLAKNEKTTISYDDLTNDLCPILSVHQLYKICLLYGDGSESEQCVSTDVTTRLKLLMTDDANDDSDSFMLDDNSSIPYSVDEISNSLQGSNSLKVQAPAELLSNSAFQFLHD 1577
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral5265g00028 1577 ProSiteProfiles IQ motif profile. 807 836 IPR000048 GO:0005515
Pral5265g00028 1577 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 785 884 IPR027417 -
Pral5265g00028 1577 FunFam unconventional myosin-Va 786 834 - -
Pral5265g00028 1577 FunFam Myosin heavy chain 253 308 - -
Pral5265g00028 1577 Coils Coil 990 1024 - -
Pral5265g00028 1577 ProSiteProfiles IQ motif profile. 855 884 IPR000048 GO:0005515
Pral5265g00028 1577 Gene3D - 786 833 - -
Pral5265g00028 1577 Gene3D - 834 883 - -
Pral5265g00028 1577 Gene3D - 736 785 - -
Pral5265g00028 1577 ProSiteProfiles IQ motif profile. 784 813 IPR000048 GO:0005515
Pral5265g00028 1577 CDD MyosinXI_CBD 1183 1546 IPR037975 GO:0007015
Pral5265g00028 1577 Gene3D - 667 734 - -
Pral5265g00028 1577 SMART iq_5 783 805 IPR000048 GO:0005515
Pral5265g00028 1577 SMART iq_5 758 780 IPR000048 GO:0005515
Pral5265g00028 1577 SMART iq_5 831 853 IPR000048 GO:0005515
Pral5265g00028 1577 SMART iq_5 735 757 IPR000048 GO:0005515
Pral5265g00028 1577 SMART iq_5 806 828 IPR000048 GO:0005515
Pral5265g00028 1577 SMART iq_5 854 876 IPR000048 GO:0005515
Pral5265g00028 1577 Gene3D Kinesin motor domain 66 663 IPR036961 -
Pral5265g00028 1577 ProSiteProfiles IQ motif profile. 832 858 IPR000048 GO:0005515
Pral5265g00028 1577 ProSiteProfiles Dilute domain profile. 1233 1524 IPR002710 -
Pral5265g00028 1577 Pfam IQ calmodulin-binding motif 833 848 IPR000048 GO:0005515
Pral5265g00028 1577 Pfam IQ calmodulin-binding motif 762 778 IPR000048 GO:0005515
Pral5265g00028 1577 Pfam IQ calmodulin-binding motif 856 876 IPR000048 GO:0005515
Pral5265g00028 1577 ProSiteProfiles Myosin motor domain profile. 63 733 IPR001609 GO:0003774|GO:0005524|GO:0016459
Pral5265g00028 1577 Pfam Myosin head (motor domain) 65 721 IPR001609 GO:0003774|GO:0005524|GO:0016459
Pral5265g00028 1577 MobiDBLite consensus disorder prediction 1142 1183 - -
Pral5265g00028 1577 CDD MYSc_Myo11 77 721 IPR036018 -
Pral5265g00028 1577 ProSiteProfiles Myosin N-terminal SH3-like domain profile. 9 58 IPR004009 GO:0003774|GO:0005524|GO:0016459
Pral5265g00028 1577 MobiDBLite consensus disorder prediction 1142 1160 - -
Pral5265g00028 1577 ProSiteProfiles IQ motif profile. 759 788 IPR000048 GO:0005515
Pral5265g00028 1577 Coils Coil 1098 1132 - -
Pral5265g00028 1577 SMART DIL_2 1399 1506 IPR002710 -
Pral5265g00028 1577 FunFam Class V myosin 440 581 - -
Pral5265g00028 1577 Gene3D - 253 311 - -
Pral5265g00028 1577 PANTHER MYOSIN 55 1491 - -
Pral5265g00028 1577 MobiDBLite consensus disorder prediction 1161 1183 - -
Pral5265g00028 1577 Pfam DIL domain 1400 1500 IPR002710 -
Pral5265g00028 1577 Coils Coil 878 961 - -
Pral5265g00028 1577 FunFam Myosin 2 313 429 - -
Pral5265g00028 1577 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 36 787 IPR027417 -
Pral5265g00028 1577 Pfam Myosin N-terminal SH3-like domain 11 53 IPR004009 GO:0003774|GO:0005524|GO:0016459
Pral5265g00028 1577 Coils Coil 1063 1090 - -
Pral5265g00028 1577 Gene3D Myosin VI head, motor domain, U50 subdomain 313 602 - -
Pral5265g00028 1577 PRINTS Myosin heavy chain signature 197 224 IPR001609 GO:0003774|GO:0005524|GO:0016459
Pral5265g00028 1577 PRINTS Myosin heavy chain signature 93 112 IPR001609 GO:0003774|GO:0005524|GO:0016459
Pral5265g00028 1577 PRINTS Myosin heavy chain signature 483 511 IPR001609 GO:0003774|GO:0005524|GO:0016459
Pral5265g00028 1577 PRINTS Myosin heavy chain signature 150 175 IPR001609 GO:0003774|GO:0005524|GO:0016459
Pral5265g00028 1577 PRINTS Myosin heavy chain signature 430 458 IPR001609 GO:0003774|GO:0005524|GO:0016459
Pral5265g00028 1577 SMART MYSc_2a 57 734 IPR001609 GO:0003774|GO:0005524|GO:0016459
Pral5265g00028 1577 FunFam unconventional myosin-Va 835 882 - -
Pral5265g00028 1577 Gene3D - 440 624 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral5265g00028 Pral-Chr5265 154534 170084 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral5265g00028 2 1577 Myosins gene family AT1G04600 59.873 0.0 2004
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral5265g00028 K10357 - pvy:116142503 2034.61