Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral5265g00017 ATGGCCATGCCCAATTGCTCCGTGGAACTTGCCCAGCACTTGGGTACCAACTTCGCCAACGCCACAGCCACCGCCGACTTCATCTGCAACAAGTTCAACGACACCGCTTTCGCCGTCGACAATACCTTTCTTCTCTCCTCTGCTTACCTTGTCTTCGCTATGCAGCTCGGCTTTGCCATGCTCTGTGCCGGCTCCGTTCGTGCCAAAAACACCATGAACATCATGCTCACCAACGTCCTCGATGCTGCCACCGGCGGTGTCTTCTACTATCTCTTTGGCTTCGCTTTCGCCTTTGGATCCCCGTCCAACGTATTCATTGGTCGTCACTCCTTCGGTCTCACGGATTTCCCTTCGAGTCTCTTCGATTATAGCTACTTCCTCTACCAATGGGCCTTCGCCATCGCTGCCGCTGGCATAACCAGCGGCTCCATCGCGGAGCGGACTCAGTTTGTCGCTTACCTAATCTACTCCTCTTTCCTAACCGGATTCGTTTATCCTGTTGTGTCTCATTGGGTCTGGTCCAGCGACGGCTGGGCTAACGCTACTGGTCACTCAGACCTTCTATTCGGATCCGGTGCCATAGATTTCGCTGGGTCGGGTGTGGTACACATGGTGGGCGGCGTCGCTGGTCTGTGGGGCGCACTCATAGAAGGGCCTAGGATAGGTCGATTTGACCATTCCGGTCGACCAGTCTCGCTTCGCGGGCACAGTGCCACCTTGGTTGTTCTCGGAACTTTCTTGCTCTGGTTCGGGTGGTACGGTTTTAACCCAGGTTCGTTCTTGAAGATTTTGAATCATTACGAGCCTGGAAACTACTACGGGCAGTGGAGCGCGGTGGGTAGAGCCGCCGTGACCACCACCCTAGCCGGCTGCACTGCCGCTTTGACGACTCTCTTCGGGAAGAGGATTGACTCGGGCCATTGGAACGTGACGGACGTGTGCAACGGGCTTCTAGGCGGATTTGCCGCCATCACCGCCGGATGCTCCGTCGTGGAGCCGTGGGCGGCAATCATTTGCGGATTCGTGGCGGCAGTGGTACTGATTTCATGCAACAAACTTGCGGAGAAGATGAAGTTTGACGACCCATTGGAGGCGTCACAGCTGCACGGCGGGTGCGGAGCATGGGGGCTGATCTTCACGGCGTTGTTTGCAGAGAAGAAGTACGTGAACGAGGTGTACGGAGGACCTGTGGATAGGCCATATGGGTTGTTCATGGGTGGTGGGGGGAAGCTATTGGCCGCAAATATAGTGGAGATTCTGGTGATTATTGGGTGGGTCAGTGTTACCATGGGCCCTCTGTTCCTGATTCTTCACAAGCTCGAACTATTGCGAATCTCCAAAGAAGATGAATTGGAAGGTATGGATCTGACACGACACGGTGGGTTTGCGTATGCATACGAGGATTCATCCTCAAGGAATGGGAAACAGTTGGAGATGGAAAGAATGGCAAACACGCGCGTTCAAACCACACAGTAG 1476 0.5467 MAMPNCSVELAQHLGTNFANATATADFICNKFNDTAFAVDNTFLLSSAYLVFAMQLGFAMLCAGSVRAKNTMNIMLTNVLDAATGGVFYYLFGFAFAFGSPSNVFIGRHSFGLTDFPSSLFDYSYFLYQWAFAIAAAGITSGSIAERTQFVAYLIYSSFLTGFVYPVVSHWVWSSDGWANATGHSDLLFGSGAIDFAGSGVVHMVGGVAGLWGALIEGPRIGRFDHSGRPVSLRGHSATLVVLGTFLLWFGWYGFNPGSFLKILNHYEPGNYYGQWSAVGRAAVTTTLAGCTAALTTLFGKRIDSGHWNVTDVCNGLLGGFAAITAGCSVVEPWAAIICGFVAAVVLISCNKLAEKMKFDDPLEASQLHGGCGAWGLIFTALFAEKKYVNEVYGGPVDRPYGLFMGGGGKLLAANIVEILVIIGWVSVTMGPLFLILHKLELLRISKEDELEGMDLTRHGGFAYAYEDSSSRNGKQLEMERMANTRVQTTQ 491
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral5265g00017 491 ProSitePatterns Ammonium transporters signature. 195 220 IPR018047 GO:0008519|GO:0016020|GO:0072488
Pral5265g00017 491 Gene3D Ammonium transporter AmtB like domains 15 484 IPR029020 -
Pral5265g00017 491 PANTHER AMMONIUM TRANSPORTER 27 467 - -
Pral5265g00017 491 Pfam Ammonium Transporter Family 43 464 IPR024041 GO:0008519|GO:0016020|GO:0072488
Pral5265g00017 491 SUPERFAMILY Ammonium transporter 39 445 - -
Pral5265g00017 491 FunFam Ammonium transporter 21 479 - -
Pral5265g00017 491 NCBIfam ammonium transporter 40 464 IPR001905 GO:0008519|GO:0016020|GO:0072488
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral5265g00017 Pral-Chr5265 94469 96236 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral5265g00017 3 482 Inorganic Solute Cotransporters AT4G13510 76.230 0.0 747
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral5265g00017 K03320 - zju:107422737 774.237