Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral5265g00014 ATGGCTAACTGCTCAATCACAGTACAGTGCTTCGTCTTGGTGACGCTACTTCTGCAACTCCTCTCATCATCATCCTTGGCTTCTTCTGCAGTTACAGTCTCCATTGATGGCCACGGAGATTACACCACAATCGCCCAAGCCATATCAGAAGCTCCCTCCCACAGCGGCACAAAACACACCATTCTCGTCCGACCCGGAATCTACAAGGAACTTCTCCACATCCCACGAGACAAAACCAACATTCTTCTCATCGGCGACGGTCGTCATAATACTGTCATTCTCGGACACCAAAATGGCGGCACCTTGTCTCGAACAGCCACAGTAGCAATTCACGGAGCGGGCTTCGTGGGCCAGAGTATAGCCTTTGTGAATTCAGCTGGGCCGAAGGCGGGCCCAGGGATTGCTCTGTTGAACGCGGCGGACAGGTCGGTGCTGTACAACTGCTCCATCGAGGGCTTTCAGGACACCTTATGGGCTTCATTGGGCCGTCAATTTTACCGGGAATGCCACATCTACGGCTCCGTCGACTTCGTCATGGGAAACGCCGCCGCCGTTTTCCAGAACTGCATGCTCTACGCACGCCTCGCCAGCTTCTCCGTTTTCACCGCCCAGTCTCGCGACGACCCTCTGCAACGCACCGGTTTTGTTTTCCATTACTGTCGTTTTACGGTGTCTCCTGGTGATGACGCCGGGAAGCAGTTATCCGGTGCGGGCAACGCTATTTTAGGACGGCCATGGAGGGCGTATTCGAGGGTGGTGATCATGCGGTCGTATATTGATGATATAGTGAGTCCAATGGGGTGGGGAGAGATGAAGGGGACGCCAACAGATAAGGTGACTTACGTGGAGTTTGAGAACGAAGGGCCTCGATCGAACACACGTGGGAGAGTGAGGTGGATTGGTGTTGTGGAGGTGCATGATAAGGATCAGGTGAAGGACTTCACTGTGTCGAGGTTCATAAAAGGAGATGACTGGATCCCTCCAACTGGGGTTCCATACATGGGAGGATTATAA 1014 0.5335 MANCSITVQCFVLVTLLLQLLSSSSLASSAVTVSIDGHGDYTTIAQAISEAPSHSGTKHTILVRPGIYKELLHIPRDKTNILLIGDGRHNTVILGHQNGGTLSRTATVAIHGAGFVGQSIAFVNSAGPKAGPGIALLNAADRSVLYNCSIEGFQDTLWASLGRQFYRECHIYGSVDFVMGNAAAVFQNCMLYARLASFSVFTAQSRDDPLQRTGFVFHYCRFTVSPGDDAGKQLSGAGNAILGRPWRAYSRVVIMRSYIDDIVSPMGWGEMKGTPTDKVTYVEFENEGPRSNTRGRVRWIGVVEVHDKDQVKDFTVSRFIKGDDWIPPTGVPYMGGL 337
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral5265g00014 337 Pfam Pectinesterase 31 323 IPR000070 GO:0030599|GO:0042545
Pral5265g00014 337 Gene3D - 28 337 IPR012334 -
Pral5265g00014 337 FunFam Pectinesterase 4 27 337 - -
Pral5265g00014 337 SUPERFAMILY Pectin lyase-like 25 336 IPR011050 -
Pral5265g00014 337 PANTHER PECTINESTERASE 29 327 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral5265g00014 Pral-Chr5265 80279 81399 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral5265g00014 18 337 Carbohydrate Esterase AT3G05620 42.813 4.07e-84 262
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral5265g00014 K01051 - gmx:102665195 306.99