Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral5265g00013 ATGAAAAAGGGTCTCAAGTTTTTGGAAAATTTTGGCTCTTTGGTTCATGGTGTGAAGGCAGTATCAAAGGATGGGGATGGAGATTATGCAAGTATCAGTGAAGCAATAGCAGAAGCTCCGAGCTTCAGTAGAAAGAGATACAGAATAGAGGTGAGAGGTGGGGTGTACGAGGAGTATCTGAGAATCCCACCCGACAAGACCAACATCATGCTCATCGGAAGTGGCAGCCAAATTACGAGGATTACTGGCAATCGAAGCGCTGCCACCGATCAAAGTGCCACACTAGCGATATATGGATCAGGGTTCGTGGCCGAAAACCTAGGGTTTGTGAACACCGCAGGGAGCGACGCCGGCCCGGGAGTGGCCGTATTCAACCAGGCCGATCACAGCGCCTTTTACAAATGTGCCATCGAAGGCTTCCAAGACACCCTATGGGCCGTCTCCGGCCGCCAATTCTACCGAGACTGCGACATCTACGGCACCGTCGACTTCGTGATGGGCAACGCCGCAGCTCTCTTCCAGAACTGCAACCTCTTCGCCAGGCCCAAGGACTTCGTCACCTTCACCGCCCAGTCTCGCTCCTCCGACCGCGAAGCCACCGGTTTCGTCTTCCAATTCTGCCACTTCACCATATCCGCCGAGGACGCAGATCGGAAGTCCGAGGTCATCAGAGCAACGTTAGGTAGGCCATGGAGGGCGTATTCGAGGGTGGTGATAATGGAATCGTACATCGACTCACTGATCGATCCGAAGGGCTGGGAGATCATGTACGGCACGGCGCGTACGGACAGATTGAGTTACATAGAGTATAAGAATGAAGGGCCAGGGGCGAAGACCGGCGACAGGGTGAAGTGGCCGGGGGTTAGGGTTGTTGACGATCCGAAGGAAGTTGAAGGCTTCACTGCTTCTGTGTTTGTGGACGGCGATATTTGGATTCCTCGACTTCGGATTCCATATTATGCAGGCTCTAGCAGGACGTTGATCATTCATATTCACATTTTAATTTTATTTTAA 1014 0.5227 MKKGLKFLENFGSLVHGVKAVSKDGDGDYASISEAIAEAPSFSRKRYRIEVRGGVYEEYLRIPPDKTNIMLIGSGSQITRITGNRSAATDQSATLAIYGSGFVAENLGFVNTAGSDAGPGVAVFNQADHSAFYKCAIEGFQDTLWAVSGRQFYRDCDIYGTVDFVMGNAAALFQNCNLFARPKDFVTFTAQSRSSDREATGFVFQFCHFTISAEDADRKSEVIRATLGRPWRAYSRVVIMESYIDSLIDPKGWEIMYGTARTDRLSYIEYKNEGPGAKTGDRVKWPGVRVVDDPKEVEGFTASVFVDGDIWIPRLRIPYYAGSSRTLIIHIHILILF 337
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral5265g00013 337 Gene3D - 17 323 IPR012334 -
Pral5265g00013 337 Pfam Pectinesterase 20 309 IPR000070 GO:0030599|GO:0042545
Pral5265g00013 337 SUPERFAMILY Pectin lyase-like 15 321 IPR011050 -
Pral5265g00013 337 FunFam Pectinesterase 4 15 323 - -
Pral5265g00013 337 PANTHER PECTINESTERASE 21 313 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral5265g00013 Pral-Chr5265 74809 79107 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral5265g00013 21 322 Carbohydrate Esterase AT2G26440 46.602 3.34e-89 276
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral5265g00013 K01051 - gmx:102665195 332.798