Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral5264g00001 ATGACTCTGGTTTTACTAGGTGGTGGTGGCGGTGGCAATGGTGGCTCTTCCGCTACCCCAAATGAGCCTGCTGTGTCAAATGCTAAGTTTCTAGGCCAAGAATGTTCATCCTCGTACAAAGGCGAGGCTGAACTTGAACTGGGTTTGGGTCTGAGCCTTGGTGGTCGAGGTGGTGCTGCTGCTGCTGGGAAGGCCAAGCCTTCTTCTGCATGGGGTGAGTGTGGTCGTATTTTGACTGCTAAAGACTTCCCTTCTGGGGTCTCTCATGGACCTGCTGTTGCTGCTTCTCGTTTCTCAGACAGAGTCAGTACTGTGGGTGGTTCTGTTTCTGGCACTAAGAGAGCTGCTGACTCTGTCTCTCATGACGCTGGATCTCCTACTGCTGGCAGTCAAGTTGTTGGGTGGCCACCCATCAGGGCATATAGGATGAACAGCTTGATTAACCAAGCAAAAGCTCAAAGGGCTGAAGAAGATAAATCCAGCAGCGATAAGAGTAATCCAGATGATGTTTCAGTTGCTAAAAATGGCACCGTCACCAATACTGAAAAAAACCATCTTGGATTTGTGAAGGTGAATATGGATGGAATTCGCATTGGCAGAAAGGTAGACTTGAATTCTCATTCAAGCTATGAGACTTTAGCTCAGACACTGGAAGAAATGTTTTTCAGGCCTGCTAAATCAGCTGGTAGCGAGAAAGACCCTGGACTGAAAGCCTCTAAGCTTTTGGACGAAACGTCTGAATTTGTGCTGACATATGAAGATAAAGAGGGTGATTGGATGCTTGTGGGAGATGTTCCCTGGAGGATGTTCCTCAGCTCAGTGAGAAGGCTCCGAATCATGAGAACGTCTGAGGCCAATGGACTTGCTCCTAGATATCAAGAGAAAAATGAGAGGCTAAGGATCAAACCCATTTAG 915 0.4754 MTLVLLGGGGGGNGGSSGXTPNEPAVSNAKFLGQECSSSYKGEAELELGLGLSLGGRGGAAAAGKAKPSSAWGECGRILTAKDFPSGVSHGPAVAASRFSDRVSTVGGSVSGTKRAADSVSHDAGSPTAGSQVVGWPPIRAYRMNSLINQAKAQRAEEDKSSSDKSNPDDVSVAKNGTVTNTEKNHLGFVKVNMDGIRIGRKVDLNSHSSYETLAQTLEEMFFRPAKSAGSEKDPGLKASKLLDETSEFVLTYEDKEGDWMLVGDVPWRMFLSSVRRLRIMRTSEANGLAPRYQEKNERLRIKPI 305
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral5264g00001 305 PANTHER AUXIN-RESPONSIVE PROTEIN IAA17 45 288 IPR003311 GO:0005634|GO:0006355
Pral5264g00001 305 Gene3D - 182 295 - -
Pral5264g00001 305 SUPERFAMILY CAD & PB1 domains 185 281 - -
Pral5264g00001 305 Pfam AUX/IAA family 46 292 IPR033389 -
Pral5264g00001 305 MobiDBLite consensus disorder prediction 6 26 - -
Pral5264g00001 305 MobiDBLite consensus disorder prediction 106 132 - -
Pral5264g00001 305 ProSiteProfiles PB1 domain profile. 187 285 IPR000270 GO:0005515
Pral5264g00001 305 FunFam Auxin-responsive protein 182 293 - -
Pral5264g00001 305 MobiDBLite consensus disorder prediction 150 179 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral5264g00001 Pral-Chr5264 7358 10331 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral5264g00001 190 303 B3 DNA Binding Superfamily AT1G59750 34.783 1.17e-13 69.3
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR AUX/IAA Pral5264g00001 AUX_IAA 1.1e-62 CL0072
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral5264g00001 K14484 - qsa:O6P43_003143 343.584