LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Pral5258g00068	ATGAAAGACGATTTGCCAGTGGGTTATCAGATTGATACAGCATGTGGCTCCCCAAGGCATCTCAAAAAGCCAAACCAGGCCGCAAAAAAGACATCTGAATTCCAGAAATTAGAACTACCCACCAAGAAGATGATGTCTGCAAATCCTGATCCTCAAGCTACCCCATCTACAGTAACCACAGGAATCACCAGGGGCTTTCCTTCGCCCTCAAGAACCAATAACCATGGCCATGGCAGTGGAAACAGCTCTCGTAGTGACAGTTTAGAAAGCACAAGTGCGCCCATTAAGCCACATACTGGTGGTGATGTAAGGTGGGATGCCATTAACATGGTTTCTAGAGGAGCCCATCTTGATCTCAGCCATTTTCGGCTTCTCAAGCGAATTGGCTATGGGGATATTGGGAGTGTGTACCTTGTAGAACTCAGAAAAACTAAGACTTACTTTGCCATGAAAGTGATGAACAAGGCAGCTCTTATAAGTAGGAACAAACTACTAAGAGCACAGACAGAGAGGGAGATTCTTCAACTTCTTGACCACCCTTTCTTACCCACTCTGTATTCTTACTTTGAAACTGATAAGTTCTATTGTTTGGTCATGGAGTTCTGCAGTGGAGGTAACCTTCACTCTCTTCGACAGAAGCAGCCAAACCAGCATTTCACAGAAGAAGCAGCACGGTTTTATGCTTCAGAGATATTGTTAGCTCTTGAGTACCTGCATATGCTTGGCATAGTGTACAGAGACTTGAAGCCAGAGAATGTTTTAGTCAGAGATGAAGGCCATATAATGCTCTCAGATTTTGACCTATCCCTTCGCTGCTCAGTCAATCCTACACTCATCAAGTCTTCATCTGCACATGTAAGTGGTAGCAATGGCAGTAGTGGTGGGTCTGGGGCCATTTTGGATGACCAGCAAGCAGTGCAGAGTAGTGTGCAATCATCAACTTTCTTCCCGCGCATTTTACCATCAAAGAAAAACCGAAAATCAAAGTCAGATTTCGGCCTCATAAATGGAGGAGCCCTCCCTGAATTCATGGCAGAGCCTTCAGATGTGAGGTCAATGTCCTTTGTAGGGACACATGAATACCTTGCACCTGAAATCATCCGAGGAGAAGGTCATGGCAGTGCAGTAGATTGGTGGACTTTTGGGATCTTCTTGTATGAGCTTTTACATGGGACAACGCCCTTCAAAGGCGCTGGAAATAGAGCTACACTTTTCAATGTTGTAGGACAGCCCTTAAGGTTCCCAGACACTCCCCAGGTAAGTGCTGCAGCAAAAGACCTTATCAAAGGATTGCTAGTGAAGGAACCTCCAAAGCGCATTGCATATATAAGGGGTGCCACAGAAATAAAACAGCACCCATTTTTTGAGGGAGTGAACTGGGCTCTAGTTAGAAGTGCCCTGCCTCCTCATATACCAGATCCTGTAGATTTTACCAAGTATGCTAGCAACGAATCAGCAGAAGCAGCAGACAAGGTGATGGATATAGCAAAAGATAAAAACGGCCCACATGCTCCAGCTGATTCTTCTTACATGGATTTTGAGTATTTTTAA	1551	0.4481	MKDDLPVGYQIDTACGSPRHLKKPNQAAKKTSEFQKLELPTKKMMSANPDPQATPSTVTTGITRGFPSPSRTNNHGHGSGNSSRSDSLESTSAPIKPHTGGDVRWDAINMVSRGAHLDLSHFRLLKRIGYGDIGSVYLVELRKTKTYFAMKVMNKAALISRNKLLRAQTEREILQLLDHPFLPTLYSYFETDKFYCLVMEFCSGGNLHSLRQKQPNQHFTEEAARFYASEILLALEYLHMLGIVYRDLKPENVLVRDEGHIMLSDFDLSLRCSVNPTLIKSSSAHVSGSNGSSGGSGAILDDQQAVQSSVQSSTFFPRILPSKKNRKSKSDFGLINGGALPEFMAEPSDVRSMSFVGTHEYLAPEIIRGEGHGSAVDWWTFGIFLYELLHGTTPFKGAGNRATLFNVVGQPLRFPDTPQVSAAAKDLIKGLLVKEPPKRIAYIRGATEIKQHPFFEGVNWALVRSALPPHIPDPVDFTKYASNESAEAADKVMDIAKDKNGPHAPADSSYMDFEYF	516

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Pral5258g00068	516	Gene3D	Phosphorylase Kinase; domain 1	120	205	-	-
	Pral5258g00068	516	FunFam	Serine/threonine-protein kinase D6PK-like	120	205	-	-
	Pral5258g00068	516	ProSiteProfiles	Protein kinase domain profile.	122	455	IPR000719	GO:0004672\|GO:0005524\|GO:0006468
	Pral5258g00068	516	FunFam	Serine/threonine-protein kinase AGC1-7	348	473	-	-
	Pral5258g00068	516	FunFam	serine/threonine-protein kinase D6PK-like	206	273	-	-
	Pral5258g00068	516	ProSitePatterns	Serine/Threonine protein kinases active-site signature.	243	255	IPR008271	GO:0004672\|GO:0006468
	Pral5258g00068	516	CDD	STKc_phototropin_like	120	476	-	-
	Pral5258g00068	516	Gene3D	Transferase(Phosphotransferase) domain 1	206	275	-	-
	Pral5258g00068	516	PANTHER	FLIPPASE KINASE 1-RELATED	52	481	-	-
	Pral5258g00068	516	MobiDBLite	consensus disorder prediction	1	99	-	-
	Pral5258g00068	516	MobiDBLite	consensus disorder prediction	47	94	-	-
	Pral5258g00068	516	SUPERFAMILY	Protein kinase-like (PK-like)	119	481	IPR011009	-
	Pral5258g00068	516	SMART	serkin_6	122	455	IPR000719	GO:0004672\|GO:0005524\|GO:0006468
	Pral5258g00068	516	Pfam	Protein kinase domain	343	455	IPR000719	GO:0004672\|GO:0005524\|GO:0006468
	Pral5258g00068	516	Pfam	Protein kinase domain	123	273	IPR000719	GO:0004672\|GO:0005524\|GO:0006468
	Pral5258g00068	516	Gene3D	Transferase(Phosphotransferase) domain 1	331	473	-	-

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Pral5258g00068	Pral-Chr5258	522062	526023	Dispersed/Wgd

Functional genes information

Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Pral5258g00068	88	516	AGC Kinase Gene Family	AT1G79250	72.646	0.0	660

Transcription factors information

Select	Regulatory Factors	Family	Gene	Hmm_acc	Hmm_name	E_value	Clan
	PK	AGC_RSK-2	Pral5258g00068		Pkinase	1.9e-38	CL0016

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Pral5258g00068	-		-	qsa:O6P43_029431	729.554