Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral5258g00010 ATGGCAGAGGTGGATGAGTGTCGCAGTAGCGCCATCACGGAAGCCGGCAGAAGGGAACCGCTTCTTCCGTCGTCGGACGTCAAGTCGGCGAAGCCTTCTTCTCCAATGTCCTGGAGACTCAATGTTAAGGAGTTTCGTTTGCCAAGCCATAGTGGTGACCATCCTAATCACCGTTCTTTCGGCTTTAAAGGCCTTCTTCGCAGACCCCGAAAGCAACGCAAGGTGGCAGAATATTACAAGAACCAAGAAAGGCTCCTTGAAGGATTCAATGAGATGGATACAATGAATGAAACGGGTTTCTTTCCCGGAAGTCTCACTGAGGATGAAATGAAGCAACTAGCAAAGAGGGAGAGAGTGGCAGTTCATGTGTCAAATTTTGCTAACTTGGTGTTATTTTCAGCAAAGGTTTATGCTTCAGTTATGAGCCAATCGTTAGCAGTCATTGCCTCAACACTAGACTCCCTCCTGGATCTCTTATCTGGGTTGATATTGTGGTTCACTTCCCATGCCATGAAAAACCCAAACCAATATCATTACCCAATTGGCAAGAAACGGATGCAACCAGTGGGTATCATTGTTTTTGCATCTGTGATGGCAACCCTGGCCTGTGAATGCACGTGTGATGTTGCAGAACCAGACGCGGCCACCCAAAAGGACAAACCAAGCCAAACTCTCAAATTCAAAGTCGTCTCTATCGCTTCCATCCTCGTCGCCGGTGCTCTTGGGGTGAGCCTCCCTTTACTGAGCCGGAAAGTCCCATATCTCGACCCCCAGAACGACGTGTTCTTCATGGTGAAGGCTTTCGCCGCCGGCGTGATCCTCGCAACTGGGTTCGTTCATATATTACCAGACGCCTTCGAGACTCTCACTTCGCCGTGCTTGAAGCACGGCCCGTGGTCCAAATTCCCGTTCACCGGCCTCATCGCCATGGCGGCTTCGGTGGTGACGCTAATGACAGATTCAATCGCCACAGGGTACTATAAGAAGCAACATTTCAACAGCTCAAAGCAAGTTTCTACAGATGCTGATGAATTAGAATCAGGAAATGAAAATGCTGGTCACGTTCATGTGCATACCCACGCCACACATGGCCATGCTCATGGATCATCTCACGATGTCGAACTACTAACATCATCATCAGCTGAAGTGATCCGTCACAGAATCATATCGCAGGTGTTGGAGTTAGGAATAGTGGTTCATTCTGTGATCATTGGGATATCACTGGGAGCTGCGCAAAGCGTTCAAACTATAAAGCCTCTTCTTGTGGCACTTTCATTTCATCAGTTTTTTGAGGGCATGGGTCTTGGTGGCTGCATTTGCCAGGCAAAATTCAAGTCAACATCGGCAGCAATAATGGCAATATTTTTCTCACTGACAACGCCAATGGGGATAGCGATAGGAGTGGGAATATCAGGAGTTTACAGAGGCAACACCCCAGCGGCTCTCATAGTGGAAGGAGTCTTCAACTCTGCATCTGCAGGAATTCTCATATATATGGCTTTGGTTGATCTTCTTGCTGCTGATTTCATGAACCCTAAGCTTCAATCCAACTCCAAGATTCAACTTTCTGCTCATCTCTCTCTTCTTCTCGGCATAGCTTCCATGTCTTCTCTAGCCATCTGGGCTTGA 1629 0.4788 MAEVDECRSSAITEAGRREPLLPSSDVKSAKPSSPMSWRLNVKEFRLPSHSGDHPNHRSFGFKGLLRRPRKQRKVAEYYKNQERLLEGFNEMDTMNETGFFPGSLTEDEMKQLAKRERVAVHVSNFANLVLFSAKVYASVMSQSLAVIASTLDSLLDLLSGLILWFTSHAMKNPNQYHYPIGKKRMQPVGIIVFASVMATLACECTCDVAEPDAATQKDKPSQTLKFKVVSIASILVAGALGVSLPLLSRKVPYLDPQNDVFFMVKAFAAGVILATGFVHILPDAFETLTSPCLKHGPWSKFPFTGLIAMAASVVTLMTDSIATGYYKKQHFNSSKQVSTDADELESGNENAGHVHVHTHATHGHAHGSSHDVELLTSSSAEVIRHRIISQVLELGIVVHSVIIGISLGAAQSVQTIKPLLVALSFHQFFEGMGLGGCICQAKFKSTSAAIMAIFFSLTTPMGIAIGVGISGVYRGNTPAALIVEGVFNSASAGILIYMALVDLLAADFMNPKLQSNSKIQLSAHLSLLLGIASMSSLAIWA 542
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral5258g00010 542 Pfam Cation efflux family 123 500 IPR002524 GO:0006812|GO:0008324|GO:0016020|GO:0055085
Pral5258g00010 542 Gene3D Cation efflux protein transmembrane domain 118 253 IPR027469 -
Pral5258g00010 542 Pfam ZIP Zinc transporter 226 539 IPR003689 GO:0016020|GO:0030001|GO:0046873|GO:0055085
Pral5258g00010 542 NCBIfam ZIP zinc/iron transport family 217 542 IPR004698 GO:0005385|GO:0016020|GO:0071577
Pral5258g00010 542 SUPERFAMILY Cation efflux protein transmembrane domain-like 115 279 IPR027469 -
Pral5258g00010 542 PANTHER ZINC/IRON TRANSPORTER 224 535 - -
Pral5258g00010 542 MobiDBLite consensus disorder prediction 1 35 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral5258g00010 Pral-Chr5258 102938 117852 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral5258g00010 203 542 Inorganic Solute Cotransporters AT3G12750 60.290 1.97e-141 410
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral5258g00010 K14709 - qsa:O6P43_029395 456.832