Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral5255g00103 ATGGAACAGAAGAGCGTTTTGTTCTCGGCATTGAGTGTGGGGGTTGGTTTAGGTGTGGGGATCGGGCTGAGCCAGGGTCAAGCCGTGCAGAAATGGGTTGGCGGGAATCGTGAGTCTCGAGAGCTTACTGGGGAGCTGATTGAGAAGGAGCTCAAGAGGCAGGTGGTTGATGGAAGGAGCGGCAATGTCACATTCGATGATTTTCCTTATTTCTTGAGTGAAAGAACTCGCGTGTTGCTGACAAGTGCTGCATATGTTCATTTAAAACAATATCACTTCTCCAAACACACCCGAAACCTTACACCCGCAAGCCAGGCTATATTACTTTCTGGACCTGCAGAATTGTACCAACAGATGCTTGCCAAAGCTTTAGCACATTACTTTGAATCAAAGTTGCTTTTGCTTGATGTTGCTGACTTCTCTAGGATGGTGCAGAACAGATATGGATGTGCAAAGAGGGAATCATCTTTGAAAAGGTCCCTATCCGAGTTGACTCTGGAAAAAGTGTCCAGTTTGTTTGGTTCCTTGCCAATCACTTCGCCCAGTGACACTAGAGGAAATTCACGCCGACAGATTAAAGGTAACGAAGCTTCTGATAATCCTCCGAGACACCGTAGGAATGCTTCTGTTGCAGCTGATATGAATAGCATTTCTTCCTATCCTGCATCAACAACTTCAGGTCCCCAGAAGCGTCCAAGCAGTATATGCCTAGATGAAAAAATGTTTCTGCATTCACTCTATAAGGTCTTGGTTTCTGTCTCGGAAACCAGTCCCATAATCCTATATATCAGGAATGCTGAGAATCTTTTTCTTAATTCACCCGCGTTATACAGTTTGTTCCAAAGAATGTTAAAGAAAATTTCAGGGTCAGTGTTGATACTTGGCTCCAAGATATTAGATTCAGAAGATGATTACAGAGAAGTTGATGAGAAGCTCACCGTGTTATTTCCTTACACCATTGAGATCAAATCGCCTGAAGATGAGGCCAACCCTGGCAGCTGGAAAGCCAAGCTGGAAGAGGACATGAAAGTACTTCAGTTTCAAGATAGCAGAAACCACATTGCTGAAGTACTTGCTGAAAATGATATTGAATGTGATGATTTGAACAGTATCTGTCATTCAGACACAATGCTTCTCAGTCAATACATTGAAGAGATTGTGGTATCTTCAATATCTCACCATTTGATGAATAACAAACATCCAGAATACCGAAATGGGAAGTTAATCATGTCAGCCAAGAGTTTGTCCCATGGACTGAGCCTGTTCCAGGAAGGAAAAACTAGTGGGAGTGGTAATCTGGAATTGGAAAATAATGTACCTAGGAAGGACGCTGCTGGAGAAGGCATTGCTGGTGCAAGGAATGATGTACGTGCTAATGCCCCAGTACCTCAAAAGAAAAGTGAAACAGTAAAATCTGTCCCTGTGACCAAAAAGGATGGAGAGAACACTGCTCCTGTCCCTGTGAAAGCGGAAGTTCCTGACAATGAGTTTGAGAAGCGGATAAGGCCTGAAGTTATCCCTGCAAATGAGATAGGGGTTACATTTGCAGACATAGGTGCATTAGATGAAATTAAGGAATCACTTCAAGAGATGGTCATGCTTCCCCTTCGTAGACCAGACCTCTTCAAAGGTGGCCTTCTTAAGCCATGCAGAGGCATATTGCTTTTCGGGCCTCCTGGTACTGGGAAAACTATGATGGCAAAGGCGATTGCAAATGAAGCAGGAGCAAGCTTCATCAATGTCTCGATGTCCACGATTACTTCAAAGTGGTTTGGGGAAGATGAGAAGAATGTCCGAGCTTTGTTCACACTTGCAGCAAAGGTTGCCCCTACAATAATCTTTGTTGATGAAGTTGACAGTATGCTAGGACAGAGAACAAGAAATGGAGAACATGAGGCCATGAGGAAGATAAAAAATGAGTTCATGACCCATTGGGATGGCCTATTGACCAAACCAGGTGAGCAGATTCTGGTACTAGCTGCAACCAACCGGCCATTTGACCTTGACGAAGCAATCATAAGACGGTTTGAGCGCAGAATCATGGTGGGTCTTCCATCTGCTGAAAGCAGGGAACAGATCTTGAAAACCCTGCTATCTAAAGAAAAACATGAAAACATGGACTTCAAAGAGCTTTCTGCTATCACAAAAGGATACAGTGGAAGTGATCTCAAGAACTTGTGCATGACAGCTGCATATCGACCTGTCAGGGAGCTCATGCAGAAGGAAATGTTGAAGGAAAAGGAAAAGAAGAAAAGGGAGGTAGAAGCCAAAACCTCAGAAGATGCTACAGGTATTAAAGAAACCGAAAAAGATGAAGCGATTACCCTGAGGCCTTTAAACATGGAAGACATGAAATATGCGAAGTCTCAGATCGCTGCAAGTTTTGCTGCTGAAGGGTCAATAATGAGCAAGCTGAAGCAGTGGAATGATTTGTATGGAGAAGGAGGTTCAAGGAAGAAAGAGCAGCTTTCGTACTTCCTCTAG 2484 0.4372 MEQKSVLFSALSVGVGLGVGIGLSQGQAVQKWVGGNRESRELTGELIEKELKRQVVDGRSGNVTFDDFPYFLSERTRVLLTSAAYVHLKQYHFSKHTRNLTPASQAILLSGPAELYQQMLAKALAHYFESKLLLLDVADFSRMVQNRYGCAKRESSLKRSLSELTLEKVSSLFGSLPITSPSDTRGNSRRQIKGNEASDNPPRHRRNASVAADMNSISSYPASTTSGPQKRPSSICLDEKMFLHSLYKVLVSVSETSPIILYIRNAENLFLNSPALYSLFQRMLKKISGSVLILGSKILDSEDDYREVDEKLTVLFPYTIEIKSPEDEANPGSWKAKLEEDMKVLQFQDSRNHIAEVLAENDIECDDLNSICHSDTMLLSQYIEEIVVSSISHHLMNNKHPEYRNGKLIMSAKSLSHGLSLFQEGKTSGSGNLELENNVPRKDAAGEGIAGARNDVRANAPVPQKKSETVKSVPVTKKDGENTAPVPVKAEVPDNEFEKRIRPEVIPANEIGVTFADIGALDEIKESLQEMVMLPLRRPDLFKGGLLKPCRGILLFGPPGTGKTMMAKAIANEAGASFINVSMSTITSKWFGEDEKNVRALFTLAAKVAPTIIFVDEVDSMLGQRTRNGEHEAMRKIKNEFMTHWDGLLTKPGEQILVLAATNRPFDLDEAIIRRFERRIMVGLPSAESREQILKTLLSKEKHENMDFKELSAITKGYSGSDLKNLCMTAAYRPVRELMQKEMLKEKEKKKREVEAKTSEDATGIKETEKDEAITLRPLNMEDMKYAKSQIAASFAAEGSIMSKLKQWNDLYGEGGSRKKEQLSYFL 827
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral5255g00103 827 Pfam ATPase family associated with various cellular activities (AAA) 553 683 IPR003959 GO:0005524|GO:0016887
Pral5255g00103 827 MobiDBLite consensus disorder prediction 189 203 - -
Pral5255g00103 827 Coils Coil 740 760 - -
Pral5255g00103 827 Gene3D - 685 758 - -
Pral5255g00103 827 MobiDBLite consensus disorder prediction 461 487 - -
Pral5255g00103 827 Pfam AAA+ lid domain 707 746 IPR041569 -
Pral5255g00103 827 Gene3D - 512 684 IPR027417 -
Pral5255g00103 827 MobiDBLite consensus disorder prediction 177 206 - -
Pral5255g00103 827 FunFam p-loop nucleoside triphosphate hydrolase superfamily protein 512 687 - -
Pral5255g00103 827 ProSitePatterns AAA-protein family signature. 656 675 IPR003960 GO:0005524|GO:0016887
Pral5255g00103 827 PANTHER AAA ATPASE, PUTATIVE (AFU_ORTHOLOGUE AFUA_2G12920)-RELATED-RELATED 47 826 - -
Pral5255g00103 827 SMART AAA_5 549 686 IPR003593 GO:0016887
Pral5255g00103 827 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 512 764 IPR027417 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral5255g00103 Pral-Chr5255 641497 648684 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral5255g00103 513 750 Calmodulin-binding Proteins AT3G56690 39.669 2.57e-44 171
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral5255g00103 - - gmx:100804099 1186.02