Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral5255g00084 ATGTCTTCCCGTTCATCATCAATCATAAAAGCAAATCCCACAAAACCGAACTCATTCTTCGGCGTTCCAATATGGATTCTGCTCCTAGCTTCAACAGCAGCGTTCATCACGTTCATGATTTTCATCGCTCTCTGCATTTGCTTCATCTGCTTTCGTCGTCGTCGTCACAGAAAGCTATACAAGTCCCGATTTTCTTTGCCCAAACCAATTGCTTCCAAGCATTACCGTCATCTTCGTCACGATTCCAGCTCGTCGTCCCTCGACAAGAGGCTACTCTCAGGCAATATTGATGTCTCCGGAATTCTGATGAACTTTGATCGGTTCTTGCCAAACGCCGATAACGGTAGGGAAGATGGAGATTTAGAATCGATTGTTGGATGTTCACATAGGAGTAAGAATGTTTTGGGACAGAGTATCGAGTTCGGCTTGCAGGAGATCATGAAGGCGACGAATGGATTGGCTAAAGAGAATGCGATTGGAAGTGGAGATCATGGAACTGTTTATCTCGGTTTGTTGCGGGATAATACTCGAGTGGCAGTGAAGATACTAATAAGCTACAGCTGTCAAAGTGAGGATTTTGCACTGCAAATGGAGGCAATTGGATCTGTACGACACAAGAAACTGGTCCAATTGCTTGGATATTGTAGCGAGGGAGCTTACAGGATGTCAGTATCTGAATACATAGATGATGGAAATCTGCATCAATGGCTTCACCACTTTCCAGGAAAAGTCAGCCCTCTAACATGGGAGACCAGATTGAATATTATCCAGGGTGTGGCGAAAGGATTGGCCTACCTTCATGAGGACGTTGAACCCAAGATTCTCCATGGAAGCTTAAAATCTAGTAATATTTTCCTTGATCACCAGTGGAATCCCAAGATCTCTGATTTTGGCCTTGCTAACCTTTTCACCGCTAAGTGGACTCCTAATATGATGGAAACATCGAGTTTCATGGATCCAAAAAGTCATTCCACTAGGGATTTCAGTGGGAGCAGTGACATTTATAGTTTCGGAGTCCTCATAATGGAGATTATATCAGGAAGGACTCCTTTAGATCATACTCTACCCCAGGAAGATTTAGTTCACTGGTTTAAGTCCAAGATTGGAAATGAAAATATCGACCACCTGGTGGACTCAAAATTGCCTGAAATGCCTCCATCCAAGGAGCTCAAACAGATGATTTTGGTATCTCTTCGATGCGTTGATCCTGATGTGAATCCAAAACTCAAAATGGGAGATGTGATTCGGATGCTTGAGCCTCGCGATCTCCTTCTTTCTAATGAACACGACATTGCTAGGGAAGTTTATGAATACAATCACTCGCCACAAAGTGACCCTGCCTCAGAATTAGAAGTGTTTTTGTGCGTATCTGGGAGAACGTTTTTGGGAAGTGAAGTTCTTTTGGGTCTTGTTGTGCCTCGAGGGAAGATCCAGCAGGAGAAGATGATGAATGAGACAGAGACCCCAGAAATGGCTATGGACTCATGGGTTTCCTACGTTATTGTCAACGAGATGATCAACTGA 1524 0.4377 MSSRSSSIIKANPTKPNSFFGVPIWILLLASTAAFITFMIFIALCICFICFRRRRHRKLYKSRFSLPKPIASKHYRHLRHDSSSSSLDKRLLSGNIDVSGILMNFDRFLPNADNGREDGDLESIVGCSHRSKNVLGQSIEFGLQEIMKATNGLAKENAIGSGDHGTVYLGLLRDNTRVAVKILISYSCQSEDFALQMEAIGSVRHKKLVQLLGYCSEGAYRMSVSEYIDDGNLHQWLHHFPGKVSPLTWETRLNIIQGVAKGLAYLHEDVEPKILHGSLKSSNIFLDHQWNPKISDFGLANLFTAKWTPNMMETSSFMDPKSHSTRDFSGSSDIYSFGVLIMEIISGRTPLDHTLPQEDLVHWFKSKIGNENIDHLVDSKLPEMPPSKELKQMILVSLRCVDPDVNPKLKMGDVIRMLEPRDLLLSNEHDIAREVYEYNHSPQSDPASELEVFLCVSGRTFLGSEVLLGLVVPRGKIQQEKMMNETETPEMAMDSWVSYVIVNEMIN 507
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral5255g00084 507 PANTHER OS01G0323000 PROTEIN 7 430 - -
Pral5255g00084 507 Gene3D Transferase(Phosphotransferase) domain 1 228 436 - -
Pral5255g00084 507 Pfam Protein tyrosine and serine/threonine kinase 155 366 IPR001245 GO:0004672|GO:0006468
Pral5255g00084 507 ProSitePatterns Protein kinases ATP-binding region signature. 159 181 IPR017441 GO:0005524
Pral5255g00084 507 FunFam Putative receptor-like serine/threonine-protein kinase 228 433 - -
Pral5255g00084 507 ProSiteProfiles Protein kinase domain profile. 153 409 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pral5255g00084 507 Gene3D Phosphorylase Kinase; domain 1 124 227 - -
Pral5255g00084 507 SUPERFAMILY Protein kinase-like (PK-like) 137 422 IPR011009 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral5255g00084 Pral-Chr5255 506826 509154 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral5255g00084 127 419 Trihelix Transcription Factor Family AT5G38560 36.393 8.15e-55 193
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-V Pral5255g00084 PK_Tyr_Ser-Thr 2.8e-36 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral5255g00084 - - pcin:129293787 680.248