Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral5255g00079 ATGGTCTCCAAAAACCCAAACCCCTCAGAGGGCTTCTACTTGGATTCCCCCGGCATGGCGCTTCCTGGCCTTGGTCCCTTCGCCTCCGTCACCACCGCCGCTGCCGCAGCTACCACGTCTGCTTCCACCGCTAATTCATCGGATGACCCTTCGAAGAAGATCCGGAAACCGTACACTATAACCAAGTCCAGAGAGAGCTGGAGCGAACCCGAGCACGACAAATTCCTTGAAGCCCTCCAACTTTTTGATCGTGACTGGAAAAAGATTGAAGCATTTGTTGGATCAAAGACAGTTATACAGATACGCAGCCATGCACAGAAGTATTTTCTAAAAGTGCAGAAGAGTGGAGCAAATGAACATCTGCCTCCACCCAGGCCAAAAAGAAAAGCTGCTCATCCATATCCTCAGAAGGCTTCCAAAAATGCTTTGATACCCTCTCAAATGTCAGGATCCTTTCAATCTTCATCTCCTCTGGTTGAACCTGGATATGTAATAAAGCCTGATTCCTCAACAATGATCAAAACTCCAGTTACTAATGCTGCAGTGTCTTCTTGGTCAAACAGCACTTTGCAGACGACCAATTTACTGCATGGGCCCAGAATGAATAATAGTTGCAGTAGCGGTGAAAGCACTCAGAGAGCACGGCCAATTGGTGCATCCACTGGTCAAGGGAATAATAGCCATCCGTTGAGAGTTCTGCCAGACTTTGGCCAAGTTTACAAGTTCATTGGCAGTGTATTTGACCCAAAAGCCAGTGAGCATCTGCAGAAACTAAAAAAGATGGATCCTATAGATGTTGAGACGGTACTACTGTTGATGAGAAACCTGTCTATCAATTTAGCAAGCCCAGATTTTGAGGATCATATTCAATTGAATGACTGGATTGGGCCTTAA 894 0.462 MVSKNPNPSEGFYLDSPGMALPGLGPFASVTTAAAAATTSASTANSSDDPSKKIRKPYTITKSRESWSEPEHDKFLEALQLFDRDWKKIEAFVGSKTVIQIRSHAQKYFLKVQKSGANEHLPPPRPKRKAAHPYPQKASKNALIPSQMSGSFQSSSPLVEPGYVIKPDSSTMIKTPVTNAAVSSWSNSTLQTTNLLHGPRMNNSCSSGESTQRARPIGASTGQGNNSHPLRVLPDFGQVYKFIGSVFDPKASEHLQKLKKMDPIDVETVLLLMRNLSINLASPDFEDHIQLNDWIGP 297
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral5255g00079 297 FunFam protein REVEILLE 6 isoform X1 66 114 - -
Pral5255g00079 297 Gene3D - 67 114 - -
Pral5255g00079 297 MobiDBLite consensus disorder prediction 193 229 - -
Pral5255g00079 297 PANTHER SWI/SNF COMPLEX-RELATED 38 281 - -
Pral5255g00079 297 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 59 113 IPR017930 -
Pral5255g00079 297 SMART sant 63 111 IPR001005 -
Pral5255g00079 297 Pfam Myb-like DNA-binding domain 64 109 IPR001005 -
Pral5255g00079 297 MobiDBLite consensus disorder prediction 37 57 - -
Pral5255g00079 297 NCBIfam myb-like DNA-binding domain, SHAQKYF class 62 111 IPR006447 GO:0003677
Pral5255g00079 297 SUPERFAMILY Homeodomain-like 58 114 IPR009057 -
Pral5255g00079 297 CDD SANT 66 109 IPR001005 -
Pral5255g00079 297 ProSiteProfiles SANT domain profile. 62 113 IPR017884 -
Pral5255g00079 297 MobiDBLite consensus disorder prediction 193 228 - -
Pral5255g00079 297 MobiDBLite consensus disorder prediction 114 137 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral5255g00079 Pral-Chr5255 479268 485602 Tandem
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB-related Pral5255g00079 Myb_DNA-binding 9.3e-10 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral5255g00079 - - zju:107414737 433.335