Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral5255g00061 ATGTTTTCTCCATATGGGAAGATTGTATCTGAGGATTTCTTATGGCACACTCGCGGCCCCAAGCGTGGGGAGCCCCGTGGCTTTGCTTTTATCCAGTATAGCTCAAGAGAGGAAGCAGAACTGGCCAAGGAGAAAATGCATGGGAAGTTAGCTTGTGGCCGGCCACTGGTTGTTCGGCTTGCGAGTGAGAAGTGCCTGTTAGAAACAGCCAATAACTCATCAAAAGTCACGGGAGAAGGGCACAAGATACACCTTACCGGTAATGGCATGGGACAGACAAGTCGCAGTGCAAAAATAGCTGCAATAAAGAACAAATTGAAATCAATAGAGGAGGAGAGCTCTAGGCCAAAGAAGCAGAAGCTAACTGATGATGTATCTTGA 381 0.4724 MFSPYGKIVSEDFLWHTRGPKRGEPRGFAFIQYSSREEAELAKEKMHGKLACGRPLVVRLASEKCLLETANNSSKVTGEGHKIHLTGNGMGQTSRSAKIAAIKNKLKSIEEESSRPKKQKLTDDVS 126
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral5255g00061 126 PANTHER HETEROGENEOUS NUCLEAR RIBONUCLEOPROTEIN 20 118 - -
Pral5255g00061 126 SUPERFAMILY RNA-binding domain, RBD 1 68 IPR035979 GO:0003676
Pral5255g00061 126 Gene3D - 1 73 IPR012677 -
Pral5255g00061 126 Pfam RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) 1 56 IPR000504 GO:0003723
Pral5255g00061 126 ProSiteProfiles Eukaryotic RNA Recognition Motif (RRM) profile. 1 63 IPR000504 GO:0003723
Pral5255g00061 126 MobiDBLite consensus disorder prediction 107 126 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral5255g00061 Pral-Chr5255 397759 398560 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral5255g00061 1 64 Eukaryotic Initiation Factors Gene Family AT3G16380 39.062 9.61e-09 50.4
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral5255g00061 K24527 - gmx:100806572 216.468